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CDS information : Lando_00050


close this sectionLocation

Organism
StrainS136
Entry nameLandomycin
Contig
Start / Stop / Direction5,135 / 5,404 / + [in whole cluster]
5,135 / 5,404 / + [in contig]
Location5135..5404 [in whole cluster]
5135..5404 [in contig]
TypeCDS
Length270 bp (89 aa)
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close this sectionAnnotation

Category1.1 PKS
Productpolyketide synthase acyl carrier protein subunit
Product (GenBank)acyl carrier protein homolog
Gene
Gene (GenBank)lanC
EC number
Keyword
  • type II PKS
Note
Note (GenBank)
  • LanC
Reference
ACC
PmId
[9933932] Cloning and characterization of a gene cluster from Streptomyces cyanogenus S136 probably involved in landomycin biosynthesis. (FEMS Microbiol Lett. , 1999)
Related Reference
ACC
Q56165
NITE
Jado_00100
PmId
[7881555] Cloning and characterization of polyketide synthase genes for jadomycin B biosynthesis in Streptomyces venezuelae ISP5230. (Microbiology. , 1994)
[9224566] Iterative type II polyketide synthases, cyclases and ketoreductases exhibit context-dependent behavior in the biosynthesis of linear and angular decapolyketides. (Chem Biol. , 1997)

close this sectionPKS/NRPS Module

ACP7..80

close this sectionSequence

selected fasta
>polyketide synthase acyl carrier protein subunit [acyl carrier protein homolog]
MSQPEFTVEDLKRILVEGAGADEGVDLDSDILDTDFESLGYESLALLETAGRIEREFGIT
LDDEVFIDNPTPRELVAAVNAKLPGSLAA
selected fasta
>polyketide synthase acyl carrier protein subunit [acyl carrier protein homolog]
ATGTCTCAGCCCGAGTTCACCGTCGAGGACCTCAAGCGCATCCTGGTGGAGGGCGCGGGC
GCCGACGAGGGCGTCGACCTCGACAGCGACATCCTCGACACCGACTTCGAGAGCCTCGGT
TACGAGTCGCTGGCCCTCCTGGAGACTGCCGGGCGCATCGAGCGCGAGTTCGGCATCACC
CTCGACGACGAGGTCTTCATCGACAACCCCACGCCGCGTGAGCTGGTGGCGGCCGTCAAC
GCGAAGCTGCCCGGCTCCCTCGCCGCCTGA
ACP7..80
ACP19..240

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR006162 Phosphopantetheine attachment site (PTM)
 [38-53]  PS00012
PS00012   PHOSPHOPANTETHEINE
IPR009081 Acyl carrier protein-like (Domain)
 [5-84]  2.5e-18 G3DSA:1.10.1200.10
G3DSA:1.10.1200.10   ACP_like
 [7-80]  PS50075
PS50075   ACP_DOMAIN
 [26-79]  2.3e-12 PF00550
PF00550   PP-binding
 [4-86]  2.39999798157265e-17 SSF47336
SSF47336   ACP_like
SignalP No significant hit
TMHMM No significant hit