open/close all

CDS information : MUP_00630

Location

Organism	Mycobacterium ulcerans
Strain	Agy99
Entry name	Mycolactone
Contig	BX649209
Start / Stop / Direction	157,547 / 157,888 / + [in whole cluster] 157,547 / 157,888 / + [in contig]
Location	157547..157888 [in whole cluster] 157547..157888 [in contig]
Type	CDS
Length	342 bp (113 aa)

Annotation

Category
Product
Product (GenBank)	probable transposase for the insertion element IS2404 (fragment)
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	MUP063, -, len: 113 aa. Probable IS2404 transposase fragment, highly similar to the C-terminus of O07439 Putative transposase from M. ulcerans (327 aa), fasta scores: opt: 503, E(): 1.9e-31, (96.104% identity in 77 aa overlap). Note that this homology extends across the upstream TAG stop codon into the upstream MUP062, suggesting a possible readthrough of the previous stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP029 + MUP030 and MUP047 + MUP048.

Sequence

>[probable transposase for the insertion element IS2404 (fragment)]
MTATDQRSVEVVYAICSLPFEHARPTAIMTWMRQHCGIENSLHWIRDVTFDEDRHRAHTG
NGAQVLATLRNTAINLHRLNGADNIAEACRITALTANRRLDLLNPQFPSSQAC

>[probable transposase for the insertion element IS2404 (fragment)]
ATCACCGCCACCGACCAGCGCAGCGTGGAGGTGGTCTATGCCATCTGCAGCCTGCCGTTC
GAGCACGCCCGCCCTACCGCGATCATGACCTGGATGCGTCAACACTGCGGAATCGAGAAC
AGCCTGCACTGGATACGCGACGTCACCTTCGACGAAGACCGTCACAGGGCACATACCGGA
AACGGCGCACAGGTCCTAGCAACGCTACGCAACACCGCGATCAATCTGCACCGCCTCAAC
GGCGCCGACAACATCGCCGAAGCCTGCCGGATCACCGCTTTGACCGCCAACCGCCGCCTA
GACCTCCTCAACCCACAATTCCCCAGCTCACAAGCCTGCTAA

Feature

BLASTP Database:UniProtKB:2010_04	show BLAST table
InterPro Database:interpro:26.0	IPR002559 Transposase, IS4-like (Domain) PF01609 Transposase_11
SignalP	Eukaryota
TMHMM	No significant hit

MUP_00620 MUP_00640

Advanced search

KS seq Analysis

List

Other

Information