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CDS information : MUP_00710


close this sectionLocation

Organism
StrainAgy99
Entry nameMycolactone
Contig
Start / Stop / Direction165,089 / 164,673 / - [in whole cluster]
165,089 / 164,673 / - [in contig]
Locationcomplement(164673..165089) [in whole cluster]
complement(164673..165089) [in contig]
TypeCDS
Length417 bp (138 aa)
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close this sectionAnnotation

Category
Product
Product (GenBank)conserved hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • MUP071c, -, len: 138 aa. Conserved hypothetical protein, weakly similar to the N-terminus of Q9KYC4 Hypothetical protein SCO6906 from Streptomyces coelicolor (529 aa), fasta scores: opt: 153, E(): 0.0041, (29.060% identity in 117 aa overlap). Similarity to Q9KYC4 continues in the following CDS, and this could be accounted for by a frameshift, although the sequence has been checked and no discrepancy was found.

close this sectionSequence

selected fasta
>[conserved hypothetical protein]
MLRSPDWMELIEKAPQWDLRFAVPEVCLLEAVADVPREWRKRRSEVAKLAVGEFGLTQSQ
NEWLDVIDRKIDGYEEALGARLADIEADIVPIPEGVNLRDIVQRAIDRRKPYQEGEEKRR
LSRHADLVYDTTHRGCGS
selected fasta
>[conserved hypothetical protein]
ATGCTTCGATCCCCCGACTGGATGGAGCTGATCGAAAAGGCGCCGCAATGGGACCTCCGA
TTCGCTGTTCCCGAAGTTTGCCTGCTCGAAGCAGTCGCTGATGTCCCCAGAGAATGGCGC
AAACGGCGAAGTGAGGTAGCAAAGCTCGCCGTCGGGGAATTCGGCCTCACGCAATCGCAG
AACGAATGGCTCGACGTCATCGACCGAAAAATCGACGGATACGAGGAAGCGTTGGGGGCG
CGGCTGGCAGACATCGAGGCCGACATTGTCCCGATACCCGAGGGTGTCAATCTGCGTGAC
ATCGTGCAGCGGGCCATCGACCGGCGCAAACCTTATCAGGAGGGAGAGGAAAAAAGACGG
CTTTCGCGACACGCTGATTTGGTATACGACACAACACATCGCGGTTGCGGATCGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-33]  0.163 Signal
Eukaryota   
TMHMM No significant hit