open/close all

CDS information : Medem_00100

Location

Organism	Streptomyces sp.
Strain	AM-7161
Entry name	Medermycin
Contig	AB103463
Start / Stop / Direction	9,056 / 9,697 / + [in whole cluster] 9,056 / 9,697 / + [in contig]
Location	9056..9697 [in whole cluster] 9056..9697 [in contig]
Type	CDS
Length	642 bp (213 aa)

Annotation

Category	4.1 transcriptional regulator
Product	putative TetR family transcriptional regulator
Product (GenBank)	Tet-R family transcriptional regulator
Gene
Gene (GenBank)	med-ORF28
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q7WT32 PmId [12855716] Cloning, sequencing and heterologous expression of the medermycin biosynthetic gene cluster of Streptomyces sp. AM-7161: towards comparative analysis of the benzoisochromanequinone gene clusters. (Microbiology. , 2003)
Family/Domain	FD IPR001647

Sequence

>putative TetR family transcriptional regulator [Tet-R family transcriptional regulator]
MARRAPRYAEAERNDRALLEAAKKVLAVDGAHTSVATIAARAGVGIASLYRRYRTKEELF
QHLCALSLGQWIQAVEEGLAHDDPWEGLVHYITAAIEFSGGALGPLAGTIPVTDEMAEKF
TRSEELTRSLIARAHEAGVLRADATAVDVSLLIEQLGKSSLVEQFEVQGRADLVDEASNA
RRRIIAIAVDGLRAGHGPLPGRPPGPDLLAERW

>putative TetR family transcriptional regulator [Tet-R family transcriptional regulator]
ATGGCCCGACGAGCTCCCCGATACGCCGAAGCGGAACGCAACGACCGCGCCCTCCTGGAG
GCAGCCAAGAAGGTCCTCGCCGTGGACGGCGCCCATACGTCCGTGGCGACGATCGCGGCG
CGCGCGGGAGTCGGCATCGCCAGCCTCTACCGGCGGTACCGCACCAAGGAGGAGCTGTTC
CAGCACCTGTGCGCCCTGTCGCTCGGGCAGTGGATCCAGGCGGTGGAGGAGGGGCTCGCG
CACGACGACCCCTGGGAGGGGCTCGTCCACTACATCACCGCCGCCATCGAGTTCAGTGGC
GGTGCGCTCGGCCCGCTGGCCGGCACGATCCCCGTCACCGACGAGATGGCCGAGAAGTTC
ACCCGGTCCGAGGAGCTGACGCGGTCCCTGATCGCGCGCGCCCACGAGGCGGGGGTGCTC
CGGGCGGACGCCACGGCCGTGGACGTCTCCCTCCTCATCGAGCAGCTCGGGAAGTCCTCC
CTGGTCGAGCAGTTCGAGGTCCAGGGCAGGGCCGACCTCGTCGACGAGGCGAGCAACGCC
CGCCGCCGCATCATCGCCATCGCGGTCGACGGGCTCCGCGCCGGGCACGGTCCGCTCCCG
GGCCGGCCGCCCGGCCCCGACCTCCTCGCCGAACGCTGGTAG

Feature

BLASTP Database:UniProtKB:2010_04	show BLAST table
InterPro Database:interpro:26.0	IPR001647 Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal (Domain) PR00455 HTHTETR PF00440 TetR_N PS50977 HTH_TETR_2 IPR009057 Homeodomain-like (Domain) SSF46689 Homeodomain_like IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal (Domain) SSF48498 TetR_like_C IPR012287 Homeodomain-related (Domain) G3DSA:1.10.10.60 Homeodomain-rel
SignalP	No significant hit
TMHMM	No significant hit

Medem_00090 Medem_00110

Advanced search

KS seq Analysis

List

Other

Information