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CDS information : Ncarz_00090


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Organism
StrainATCC 15944
Entry nameNeocarzinostatin
Contig
Start / Stop / Direction26,377 / 24,215 / - [in whole cluster]
26,377 / 24,215 / - [in contig]
Locationcomplement(24215..26377) [in whole cluster]
complement(24215..26377) [in contig]
TypeCDS
Length2,163 bp (720 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)membrane protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)

close this sectionSequence

selected fasta
>hypothetical protein [membrane protein]
MTASPPDPVPFVRNDRSRTKAWALAGICGLAGLLYLWLIGSSNYGNAYYSAAVRSMTESP
TNFLFGAADPYGAVSVDKPPLALWPQAASVAVFGYHSWSMLLPQAVEGVVTVFLLHRTVR
LWAGERVALLAALILSLTPITVAINRDNNTDSLLMMLLVAAAYSFTRSIHAGTDRGRTKW
LLLCAFFVGCGFTAKMLQAWIIVPVLALAFLLSSTSPVRRRINDVLAAGAVLVVSSFWWP
ALHDLWPGDKPYMGGSTDGSAFQLVFGYNGFGALFGTGQQPGGSGINVPLAMVGLSGGMP
GVTRMFSAEVGDQISWLLPLSLLVLTVVGAAGYRRLWFEAPGDAVQRAGWLLWGGWLVLV
GGVFSFTQGIFNTYYTTMLAPAIAAVSAAGIALLWRKYCRPDGWQWMLLPAAVALTALWA
FVLVSRDTSWHGWTRWAALGLAAFAVLVLVVAKLSPGRRPLGHAGLVVGAAAVLLSPAVW
SVGTAAVAADNGGFPTAGPPNNAFSALLRGELPDGMMPPAGMPPGGGQMPEGMELPPGLQ
LPEGAQMPGGMQMPDGVPASGEDTAASSGVRSGKGFGGSDLSAGNRRILEYAERHSGGAG
VTLAVEGGGLASSSFIIETGAPVVGMGGFLGADDSPTVDQLSEWVDRGDLRFVLTAHPGK
ARLGGMAGMGGSVQQKRLVWVRENCRLVDPGAYGGEPFDEKQAQLPVPGFSDAALYRCGA
selected fasta
>hypothetical protein [membrane protein]
GTGACCGCGTCCCCTCCGGATCCGGTGCCCTTTGTCCGGAACGACCGGAGCCGGACGAAG
GCATGGGCACTGGCCGGGATCTGTGGGCTCGCGGGCCTGCTCTACCTGTGGCTCATCGGC
TCCAGCAACTACGGCAACGCCTACTACTCCGCCGCAGTGCGGTCGATGACGGAGAGTCCG
ACCAACTTCCTGTTCGGCGCGGCGGACCCGTATGGCGCCGTCTCGGTCGACAAGCCCCCG
CTGGCACTTTGGCCCCAGGCGGCGTCGGTGGCGGTCTTCGGGTACCACAGTTGGTCGATG
CTGCTTCCCCAGGCCGTCGAAGGCGTGGTCACCGTGTTCCTGCTGCACCGCACGGTCCGC
CTGTGGGCGGGGGAACGCGTCGCGCTGCTCGCGGCACTGATCCTCTCGCTGACCCCCATC
ACCGTCGCCATCAACCGCGACAACAACACCGATTCCCTTCTGATGATGCTGCTGGTCGCG
GCGGCGTACTCGTTCACCCGCTCGATCCACGCCGGGACGGACCGTGGCCGCACCAAGTGG
CTGCTGCTGTGCGCCTTCTTCGTGGGCTGCGGATTCACGGCGAAGATGCTGCAGGCGTGG
ATCATCGTGCCGGTACTGGCTCTCGCGTTCCTACTCAGCAGCACCAGCCCGGTGAGACGC
AGGATCAACGACGTCCTGGCCGCGGGTGCCGTACTGGTCGTCTCCTCGTTCTGGTGGCCC
GCATTGCACGATTTGTGGCCGGGTGACAAGCCCTACATGGGCGGCAGCACGGACGGGAGC
GCGTTCCAGCTCGTCTTCGGCTACAACGGGTTCGGCGCGCTGTTTGGCACCGGCCAGCAG
CCCGGCGGCTCCGGGATCAACGTGCCCCTCGCGATGGTCGGGCTCTCCGGCGGAATGCCC
GGGGTCACCCGCATGTTCTCTGCCGAGGTCGGTGACCAGATCTCCTGGTTGCTCCCTCTC
AGTCTGCTGGTGCTGACCGTCGTGGGAGCCGCCGGCTACCGCCGCCTGTGGTTCGAGGCC
CCGGGTGATGCCGTGCAGCGGGCGGGCTGGCTCCTGTGGGGCGGATGGCTGGTGCTCGTC
GGCGGAGTCTTCAGTTTCACTCAGGGCATCTTCAACACGTACTACACGACGATGCTGGCG
CCCGCGATCGCCGCGGTCTCCGCGGCGGGTATCGCCCTGCTCTGGCGGAAATACTGCCGG
CCGGACGGCTGGCAGTGGATGCTCCTGCCGGCCGCGGTCGCGCTCACAGCACTCTGGGCT
TTCGTCCTGGTCTCCAGGGACACCTCGTGGCACGGCTGGACCAGGTGGGCGGCCCTGGGA
CTCGCCGCCTTCGCGGTCCTCGTCCTGGTGGTGGCCAAACTGTCGCCGGGACGGCGTCCC
CTGGGACACGCCGGGCTGGTCGTCGGGGCGGCAGCGGTGCTGCTGTCCCCAGCAGTGTGG
TCCGTGGGCACCGCGGCCGTGGCAGCCGACAATGGCGGCTTCCCCACGGCGGGTCCGCCG
AACAACGCGTTCAGCGCCCTGCTGCGCGGGGAACTCCCTGACGGCATGATGCCGCCCGCT
GGCATGCCCCCGGGCGGGGGCCAGATGCCCGAGGGCATGGAACTGCCCCCCGGTCTGCAA
CTGCCCGAGGGCGCGCAGATGCCCGGTGGCATGCAGATGCCCGATGGCGTCCCGGCATCC
GGTGAGGACACCGCCGCATCTTCCGGCGTCCGGAGCGGGAAGGGCTTCGGCGGCTCCGAC
CTCTCCGCCGGCAATCGGCGGATCCTCGAGTACGCCGAACGCCACTCTGGCGGTGCCGGC
GTCACACTCGCCGTCGAGGGCGGCGGGCTCGCTTCGTCGTCCTTCATCATCGAGACCGGT
GCCCCGGTCGTCGGCATGGGCGGATTCCTGGGCGCCGACGACTCACCCACCGTCGACCAG
CTCAGCGAGTGGGTCGACCGAGGGGACCTGAGGTTCGTTCTCACCGCCCATCCTGGCAAA
GCGCGGCTGGGCGGCATGGCCGGGATGGGCGGCAGCGTGCAGCAGAAGCGGTTGGTCTGG
GTGCGCGAGAACTGCCGACTCGTCGACCCCGGCGCGTACGGCGGCGAGCCCTTCGACGAG
AAGCAGGCTCAGCTGCCGGTACCAGGGTTCAGCGACGCAGCGCTGTATCGCTGCGGAGCG
TGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP
 [1-1]  Signal-anchor
Eukaryota   
TMHMM
 [21-40]  Transmembrane (i-o) [93-115]  Transmembrane (o-i) [122-144]  Transmembrane (i-o) [196-218]  Transmembrane (o-i) [225-242]  Transmembrane (i-o) [314-336]  Transmembrane (o-i) [349-371]  Transmembrane (i-o) [375-394]  Transmembrane (o-i) [406-423]  Transmembrane (i-o) [433-452]  Transmembrane (o-i) [465-487]  Transmembrane (i-o)
Transmembrane 11