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CDS information : Ncarz_00370


close this sectionLocation

Organism
StrainATCC 15944
Entry nameNeocarzinostatin
Contig
Start / Stop / Direction63,522 / 62,542 / - [in whole cluster]
63,522 / 62,542 / - [in contig]
Locationcomplement(62542..63522) [in whole cluster]
complement(62542..63522) [in contig]
TypeCDS
Length981 bp (326 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
GenencsE2
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)
Related Reference
ACC
Q83U65
NITE
Ncarz_00360
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)
[12536216] A genomics-guided approach for discovering and expressing cryptic metabolic pathways. (Nat Biotechnol. , 2003)
ACC
Q84HJ1
NITE
Dynm_00150
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MSIMGAFRRAVMAPSLTEVGFAGRGFAVISTEETRRLEGVPQAVVCGFEWAIGDRSLADT
ERRLSMVDADVRGFAYEGATMACAVRDAMGTRRGQRTRDLLQGDGGRPHIFLNYIGIGFA
MARLPRPLWRGILPPLTGAEYYPAMNWLAVDGYGFDRAYFDTARWVDRQRRPRPYAWQGD
ADYFLRAVDQGIGRALWFIHGAHVDHVTAAVSAFAERRHADLWSGVGLAATFAGGAPALM
TALRRNAGAHGGHLAQGAVFAAKARHHCGHVPEHTRAAVQALTGLEVRAAAELADDCAVP
ASESGVVPTYEIWRRRVRERVSAVSV
selected fasta
>hypothetical protein [unknown]
ATGTCCATCATGGGAGCGTTTCGCAGAGCGGTCATGGCGCCCTCTCTGACCGAAGTGGGT
TTCGCCGGCCGGGGTTTTGCCGTCATCTCCACCGAGGAGACCAGGCGTCTGGAAGGCGTC
CCGCAGGCTGTCGTCTGTGGTTTCGAATGGGCCATTGGGGACCGCTCGCTGGCGGACACG
GAGCGCCGCCTGTCCATGGTCGACGCGGACGTCCGGGGCTTCGCCTACGAAGGGGCGACG
ATGGCGTGCGCGGTCAGGGACGCGATGGGCACCCGGCGGGGCCAACGCACCCGGGACCTC
CTGCAGGGTGACGGAGGCAGACCCCACATCTTCCTGAACTACATCGGCATCGGATTTGCC
ATGGCACGCCTCCCCCGGCCTCTGTGGCGTGGAATCCTGCCCCCGCTCACGGGCGCCGAG
TACTACCCCGCGATGAACTGGCTGGCCGTGGACGGCTACGGATTCGACCGTGCCTACTTC
GACACGGCACGCTGGGTCGACCGGCAACGACGTCCACGGCCATATGCCTGGCAGGGGGAC
GCCGACTACTTCCTCCGCGCCGTCGACCAGGGCATCGGGCGAGCCCTGTGGTTCATCCAC
GGGGCCCACGTCGACCATGTCACCGCTGCCGTTTCCGCATTCGCCGAACGGCGCCACGCG
GACCTATGGAGTGGTGTGGGCCTGGCCGCCACCTTCGCCGGCGGCGCTCCTGCCCTGATG
ACGGCACTGCGCCGGAACGCCGGCGCGCACGGTGGGCATCTGGCCCAGGGAGCGGTCTTC
GCCGCCAAGGCGCGCCACCACTGTGGGCATGTTCCCGAGCACACGCGGGCCGCCGTACAG
GCCCTCACCGGCCTCGAGGTCCGGGCGGCCGCCGAACTCGCCGACGACTGTGCCGTCCCC
GCGTCCGAGAGCGGGGTCGTACCGACCTACGAGATCTGGCGGCGCCGAGTGCGCGAGCGG
GTCTCCGCCGTCTCCGTCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR012964 Protein of unknown function DUF1702 (Family)
 [1-322]  1.5e-124 PF08012
PF08012   DUF1702
SignalP
 [1-27]  0.3 Signal
Eukaryota   
TMHMM No significant hit