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CDS information : Ncarz_00460


close this sectionLocation

Organism
StrainATCC 15944
Entry nameNeocarzinostatin
Contig
Start / Stop / Direction72,712 / 71,738 / - [in whole cluster]
72,712 / 71,738 / - [in contig]
Locationcomplement(71738..72712) [in whole cluster]
complement(71738..72712) [in contig]
TypeCDS
Length975 bp (324 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MGANKAGLIDAGPPAGAAPDPLSVSRRRRRLVLIFSVLAGFLLTVVWSAEFVDQTVGNNV
AEAVLGQSPEAAPLTSVLTGAVFAFASGLAGTFTACNIAAFGAVTPMMDAAGTRWERTRR
SLVPLGWMSLGMVTVSALYGAVVGLVGTSMPQFSQAENVPGTLSGRSVQSMVVFGLIGLA
MLWMGLAALGYLPDPLARVSARFAHARTLFLGVLVGGFLVGRPYPLFRQLFRDAAESGNP
FYGALAFVLQSVGNIAVMAALFLLLSSAAGRRHHAWLARKPGRAALVTGAALIVAGAFTF
LYWDVRLLARREILPWYPVAPWAQ
selected fasta
>hypothetical protein [unknown]
GTGGGAGCGAACAAGGCGGGGCTGATCGATGCCGGGCCGCCTGCAGGGGCGGCCCCCGAT
CCCTTGTCCGTCTCTCGGCGGCGCCGAAGGTTGGTCCTGATCTTCAGTGTGCTGGCCGGC
TTTCTTCTGACCGTGGTGTGGTCTGCGGAGTTCGTCGACCAGACGGTCGGGAACAATGTC
GCCGAAGCCGTGCTGGGGCAAAGCCCCGAGGCGGCGCCGCTCACCTCCGTGCTGACCGGC
GCCGTGTTCGCCTTCGCCTCCGGGCTGGCAGGTACCTTCACGGCCTGCAACATTGCCGCG
TTCGGCGCAGTCACGCCCATGATGGACGCCGCGGGGACACGGTGGGAACGCACGCGCCGT
TCACTGGTCCCACTGGGGTGGATGTCCCTGGGGATGGTCACGGTATCCGCGTTGTACGGC
GCGGTCGTCGGCCTGGTGGGGACGTCCATGCCGCAGTTCTCCCAGGCCGAGAACGTCCCT
GGGACGCTGTCGGGGCGATCGGTGCAGTCGATGGTCGTCTTCGGCCTTATCGGCTTGGCG
ATGCTCTGGATGGGACTGGCCGCCCTGGGCTACCTGCCTGATCCCCTCGCCCGCGTTTCG
GCACGCTTCGCCCATGCGCGGACGCTCTTTCTCGGTGTCCTGGTCGGAGGCTTCCTCGTA
GGCCGTCCATATCCGCTGTTCCGGCAGTTGTTCCGGGACGCGGCGGAGAGCGGCAACCCG
TTTTACGGCGCTCTGGCCTTTGTGCTGCAGTCCGTCGGCAACATCGCCGTGATGGCGGCC
CTCTTCCTGCTGCTGTCCTCGGCCGCCGGCCGCCGCCATCACGCCTGGCTGGCGAGGAAG
CCCGGCCGGGCGGCTCTTGTCACCGGTGCCGCGCTCATTGTGGCGGGCGCCTTCACCTTT
CTGTACTGGGACGTCCGGCTCCTGGCCCGCAGGGAGATTTTGCCGTGGTATCCGGTTGCC
CCCTGGGCGCAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP
 [1-48]  0.617 Signal
Eukaryota   
 [1-39]  0.224 Signal
Bacteria, Gram-negative   
TMHMM
 [31-49]  Transmembrane (i-o) [82-104]  Transmembrane (o-i) [125-147]  Transmembrane (i-o) [170-192]  Transmembrane (o-i) [204-226]  Transmembrane (i-o) [241-263]  Transmembrane (o-i) [284-303]  Transmembrane (i-o)
Transmembrane 7