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CDS information : Nogl_00110


close this sectionLocation

Organism
StrainATCC 27451 (=NBRC 13445)
Entry nameNogalamycin
Contig
Start / Stop / Direction12,635 / 12,321 / - [in whole cluster]
12,635 / 12,321 / - [in contig]
Locationcomplement(12321..12635) [in whole cluster]
complement(12321..12635) [in contig]
TypeCDS
Length315 bp (104 aa)
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close this sectionAnnotation

Category3.4 other modification
ProductC-4'' epimerase(fragment)
Product (GenBank)SnoN
Gene
Gene (GenBank)snoN
EC number
Keyword
  • nogalamine
Note
Note (GenBank)
Reference
ACC
PmId
[11683270] The entire nogalamycin biosynthetic gene cluster of Streptomyces nogalater: characterization of a 20-kb DNA region and generation of hybrid structures. (Mol Genet Genomics. , 2001)
[27114534] Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway. (Proc Natl Acad Sci U S A. , 2016)

close this sectionSequence

selected fasta
>C-4'' epimerase(fragment) [SnoN]
MWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDATAAYRPTGIAFLDDL
PGTGADPLREGAPLTGDRFPLLRRPQTRQPAPARYPLPQQGHGS
selected fasta
>C-4'' epimerase(fragment) [SnoN]
ATCTGGATGCCGCGGGTCACGGTGCCACTGCGGGCCGGCGACTGCACCTTCCACCACGCC
CGCACCGTGCACAGCGCCGGGGCGAACTCGACCGACGAGCCCCGCTTGTCGACCTCCGCC
GTCTACATGGACGCCACCGCCGCCTACCGGCCGACCGGCATCGCGTTTCTCGACGACCTC
CCCGGCACCGGAGCCGACCCGCTGCGCGAGGGCGCCCCCCTCACCGGCGACCGCTTCCCC
CTGCTGCGCCGACCGCAGACCCGACAGCCCGCCCCCGCCCGGTATCCCCTTCCACAGCAA
GGACACGGATCTTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR008775 Phytanoyl-CoA dioxygenase (Family)
 [3-35]  5.6e-08 PF05721
PF05721   PhyH
SignalP
 [1-20]  0.344 Signal
Bacteria, Gram-positive   
 [1-25]  0.491 Signal
Bacteria, Gram-negative   
TMHMM No significant hit