close all open/close all

CDS information : Nogl_00140


close this sectionLocation

Organism
StrainATCC 27451 (=NBRC 13445)
Entry nameNogalamycin
Contig
Start / Stop / Direction14,684 / 14,217 / - [in whole cluster]
2,047 / 1,580 / - [in contig]
Locationcomplement(14217..14684) [in whole cluster]
complement(1580..2047) [in contig]
TypeCDS
Length468 bp (155 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)SnoO
Gene
Gene (GenBank)snoO
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[11683270] The entire nogalamycin biosynthetic gene cluster of Streptomyces nogalater: characterization of a 20-kb DNA region and generation of hybrid structures. (Mol Genet Genomics. , 2001)
Related Reference
ACC
Q2PA04
NITE
Stref_00110
PmId
[16751529] Isolation, characterization, and heterologous expression of the biosynthesis gene cluster for the antitumor anthracycline steffimycin. (Appl Environ Microbiol. , 2006)
ACC
Q9ZAT9
NITE
Adria_00050
PmId
[9864344] Doxorubicin overproduction in Streptomyces peucetius: cloning and characterization of the dnrU ketoreductase and dnrV genes and the doxA cytochrome P-450 hydroxylase gene. (J Bacteriol. , 1999)
[10631513] A two-plasmid system for the glycosylation of polyketide antibiotics: bioconversion of epsilon-rhodomycinone to rhodomycin D. (Chem Biol. , 1999)
ACC
Q53925
NITE
Actino_00020
PmId
[17227452] Possible involvement of ActVI-ORFA in transcriptional regulation of actVI tailoring-step genes for actinorhodin biosynthesis. (FEMS Microbiol Lett. , 2007)

close this sectionSequence

selected fasta
>hypothetical protein [SnoO]
MSVRTDQTAAPEDRAAATDPGFGHLYAQVQQFYARQMQLLDSGAAEEWAATFTEDGTFAR
PSSPEPARGHAELAAGARAAAERLAAEGLSHRHVIGMTAVRREPDGSVFVRSYAQVFATR
RGEAPRLHLICVCEDVLVREGPGLKVRERVVTHDA
selected fasta
>hypothetical protein [SnoO]
ATGTCGGTACGCACCGATCAGACGGCGGCACCGGAAGACCGAGCGGCGGCCACGGATCCC
GGGTTCGGGCACCTGTACGCGCAGGTGCAGCAGTTCTACGCCCGGCAGATGCAGCTCCTC
GACTCCGGCGCGGCCGAGGAGTGGGCCGCCACCTTCACCGAGGACGGCACGTTCGCCCGG
CCCTCCTCGCCGGAACCGGCACGCGGCCACGCCGAACTGGCCGCCGGCGCCCGCGCCGCC
GCCGAACGCCTCGCCGCCGAGGGCCTTTCGCACCGGCACGTCATCGGCATGACCGCGGTA
CGCCGGGAACCCGACGGCAGCGTGTTCGTACGCAGCTACGCCCAGGTCTTCGCCACCCGC
CGCGGGGAAGCTCCCCGGCTGCATCTGATCTGCGTCTGCGAGGACGTGCTCGTGCGGGAG
GGGCCGGGGCTGAAGGTGCGGGAACGGGTTGTCACGCACGACGCGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP
 [1-15]  0.147 Signal
Bacteria, Gram-negative   
TMHMM No significant hit