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CDS information : Rapam_00020


close this sectionLocation

Organism
StrainNRRL 5491
Entry nameRapamycin
Contig
Start / Stop / Direction2,319 / 1,150 / - [in whole cluster]
2,319 / 1,150 / - [in contig]
Locationcomplement(1150..2319) [in whole cluster]
complement(1150..2319) [in contig]
TypeCDS
Length1,170 bp (389 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)
Gene
Gene (GenBank)orfZ
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[7644502] The biosynthetic gene cluster for the polyketide immunosuppressant rapamycin. (Proc Natl Acad Sci U S A. , 1995)
[8635730] Organisation of the biosynthetic gene cluster for rapamycin in Streptomyces hygroscopicus: analysis of genes flanking the polyketide synthase. (Gene. , 1996)

close this sectionSequence

selected fasta
>hypothetical protein
MKFLYDDESFSFEALRAAGYAAYGGADLGEVLVTCRQIPEGDEEAWSAQWAATAARIERI
GRDALAAGHRVSAREALLRASNYYRTADFYRRENPAADAESARLAKASQQTFADAAPLLD
TPARALRIPYEDTTLPGYLFLVDDSGTPRPTVLFHGGYDSTLEEDYLALAAGALRRGYNV
IAFDGPGQGSTVREQGLHFPPDWEAVVTPVVDFALTLPEVDAEQLVLMGMSLGGYLAARA
AAFEHRVAACVLYDGVYDFHAVIAATAGRAASTPGGMEALMAQNTMVRWVVRNGRWTFGV
SGVDELVRAAEPYTMAGIADRITCPTLVLEAENDQFFKGQPQRLFDELTCQKELISFRED
EGAGEHCHEGAMFLFHQRTFDWLDTVLAG
selected fasta
>hypothetical protein
ATGAAATTCCTCTACGACGACGAGTCCTTCTCCTTCGAGGCACTGCGCGCCGCGGGCTAC
GCGGCCTATGGCGGCGCCGACCTCGGCGAGGTCCTGGTCACCTGCCGGCAGATCCCAGAG
GGAGACGAGGAAGCCTGGTCGGCCCAGTGGGCCGCGACGGCGGCGCGCATCGAGCGCATC
GGCCGGGACGCGCTGGCCGCCGGTCACCGGGTCAGCGCCCGGGAGGCGCTGCTGCGCGCG
TCCAACTACTACCGGACCGCCGACTTCTACCGCCGCGAGAATCCCGCAGCCGACGCCGAG
TCGGCGCGGCTCGCCAAGGCCTCCCAGCAGACGTTCGCCGACGCGGCCCCGCTGCTCGAC
ACTCCGGCCCGCGCCCTGCGCATCCCGTACGAGGACACCACGCTTCCCGGCTACCTGTTC
CTCGTCGACGATTCGGGCACCCCGCGCCCGACCGTGCTCTTCCACGGCGGGTACGACTCC
ACCCTCGAGGAGGACTACCTGGCGCTGGCCGCCGGCGCGCTGCGGCGCGGCTACAACGTC
ATCGCGTTCGACGGCCCCGGCCAGGGCAGCACCGTCCGCGAGCAGGGCCTGCACTTCCCG
CCGGACTGGGAGGCGGTGGTCACCCCGGTCGTCGACTTCGCGCTCACCCTGCCCGAGGTG
GACGCCGAGCAGCTCGTGCTGATGGGCATGAGCCTGGGCGGCTACCTCGCCGCGAGGGCG
GCGGCCTTCGAGCACCGCGTAGCCGCGTGCGTGCTGTACGACGGCGTCTACGACTTCCAC
GCGGTCATCGCCGCGACCGCCGGCCGTGCCGCTTCGACGCCGGGCGGCATGGAGGCGTTG
ATGGCGCAGAACACCATGGTGCGGTGGGTGGTGCGCAACGGCCGGTGGACCTTCGGTGTA
TCCGGTGTCGACGAGCTGGTCAGGGCGGCCGAGCCGTACACCATGGCGGGTATCGCCGAC
CGCATCACCTGTCCGACACTCGTGCTCGAAGCCGAGAACGACCAGTTCTTCAAGGGGCAG
CCGCAGCGGCTGTTCGACGAGCTGACCTGCCAGAAGGAGCTGATCTCCTTCCGCGAGGAC
GAAGGCGCGGGCGAGCACTGCCACGAGGGTGCGATGTTCCTGTTCCACCAGCGCACCTTC
GACTGGCTCGACACCGTGCTCGCCGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP No significant hit
TMHMM No significant hit