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CDS information : Rifam_00070


close this sectionLocation

Organism
StrainS699
Entry nameRifamycin
Contig
Start / Stop / Direction5,682 / 6,710 / + [in whole cluster]
5,682 / 6,710 / + [in contig]
Location5682..6710 [in whole cluster]
5682..6710 [in contig]
TypeCDS
Length1,029 bp (342 aa)
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close this sectionAnnotation

Category5.2 function unknown
Productmammalian cell entry family protein
Product (GenBank)putative lipoprotein
Gene
Gene (GenBank)
EC number
Keyword
  • mce operon
Note
Note (GenBank)
  • ORF25
Reference
ACC
Family/Domain
FD
IPR005693

close this sectionSequence

selected fasta
>mammalian cell entry family protein [putative lipoprotein]
MRGLLAPLIKLGIFVVVTVLFTTILGISIANINTTSTNAYNARFTDATLLLPNDDVRIAG
VRVGQVKDVHIVDKRQAEVEFEVDAGRTLPAGVTAQIKFRNLVGQRYVSLGEGDDSAGKT
LPPGGTIPLERTTPALDLTELFNGFKPLFTALNPEDVNKLSYEVIQVLQGEGGTVESLLS
HTASLATTIADKDQVIGEVIDNLNSVLDTVNAHTPQLNDLIVKLQQLVSGLAADRKPIGD
AIESLGNLAQTTSGLLGEVREPLKNDIDALGNLTSALNKNEPELEHFIQFLPTKVSTLTR
TADYGSWFNFYACEFSGSVSLPPLINDVALPLIPANRARCQG
selected fasta
>mammalian cell entry family protein [putative lipoprotein]
GTGAGGGGCCTGCTCGCGCCGCTGATCAAGCTCGGCATCTTCGTGGTCGTCACCGTGCTG
TTCACGACGATCCTCGGGATCAGCATCGCCAACATCAACACCACCAGCACCAACGCCTAC
AACGCGCGCTTCACCGACGCGACGCTGCTGCTGCCCAACGACGACGTCCGCATCGCCGGC
GTCCGGGTCGGGCAGGTCAAGGACGTGCACATCGTCGACAAGCGCCAAGCCGAGGTCGAG
TTCGAGGTCGACGCCGGCCGGACGCTGCCGGCCGGGGTGACCGCGCAGATCAAGTTCCGC
AACCTGGTCGGGCAGCGGTACGTCTCGCTCGGCGAGGGCGACGACAGCGCCGGCAAGACG
CTGCCGCCCGGCGGCACCATCCCGCTGGAGCGGACCACGCCGGCGCTGGACCTGACCGAG
CTGTTCAACGGCTTCAAGCCGCTGTTCACCGCGCTCAACCCCGAGGACGTCAACAAGCTG
TCCTACGAGGTCATCCAGGTCCTGCAGGGCGAGGGCGGCACCGTGGAAAGCCTGCTTTCG
CACACGGCGTCGCTGGCCACCACGATCGCCGACAAGGACCAGGTGATCGGCGAGGTCATC
GACAACCTCAACTCGGTGCTCGACACGGTCAACGCGCACACGCCGCAGCTCAACGACCTG
ATCGTGAAGCTGCAGCAGCTGGTGTCCGGGCTGGCCGCCGACCGCAAGCCGATCGGCGAC
GCGATCGAGAGCCTCGGCAACCTGGCGCAGACGACGTCCGGGCTGCTCGGCGAGGTCCGC
GAGCCGCTGAAGAACGACATCGACGCGCTCGGGAACCTGACGAGCGCGCTCAACAAGAAC
GAGCCGGAGCTGGAGCACTTCATCCAGTTCCTGCCGACCAAGGTGAGCACGCTGACCCGC
ACCGCGGACTACGGCTCCTGGTTCAACTTCTACGCCTGTGAGTTCTCCGGGAGCGTGAGC
TTGCCGCCACTGATCAACGACGTCGCCCTGCCCCTGATCCCGGCGAACCGGGCGAGGTGC
CAGGGATGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR003399 Mammalian cell entry-related (Domain)
 [39-111]  6.5e-13 PF02470
PF02470   MCE
IPR005693 Mammalian cell entry (Family)
 [10-295]  2.5e-72 TIGR00996
TIGR00996   Mtu_fam_mce: virulence factor Mce family protein
SignalP
 [1-30]  0.986 Signal
Bacteria, Gram-positive   
 [1-32]  0.446 Signal
Bacteria, Gram-negative   
 [1-26]  0.735 Signal
Eukaryota   
TMHMM
 [7-29]  Transmembrane (i-o)
Transmembrane 1