close all open/close all

CDS information : Rifam_00100


close this sectionLocation

Organism
StrainS699
Entry nameRifamycin
Contig
Start / Stop / Direction8,871 / 10,043 / + [in whole cluster]
8,871 / 10,043 / + [in contig]
Location8871..10043 [in whole cluster]
8871..10043 [in contig]
TypeCDS
Length1,173 bp (390 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.2 function unknown
Productmammalian cell entry family protein
Product (GenBank)putative secreted protein
Gene
Gene (GenBank)
EC number
Keyword
  • mce operon
Note
Note (GenBank)
  • ORF28
Reference
ACC
Family/Domain
FD
IPR005693

close this sectionSequence

selected fasta
>mammalian cell entry family protein [putative secreted protein]
MKKLLTVGVLATVSALALSGCAFKGIYDLPLPGGADLGDHPYTVNVEFRDVLDLTPQAGV
KVDEVPVGRVENVGLTKDGWHALVTLRVNGDVKLPANAIANVKQSSLLGEKYVELASPGA
DQAHGKLADNATIPLARTNRSVEVEELLGALSLLLNGGGVDQLNTITKELNNATSGREPD
IKALLDNANQLVTNLDRQSKNITRAIDGLNRLSSTLNDQKDKLVGAVDNLGPGLGVLEQQ
RGQLVTMLQALDNLSGVATDTVNKSQKDLVADLKALTPTLQKLGEAGNDLPKALEILLTF
PFSDQAVNGVKGDYFNLFAKVDLNLKTVVENLGNSRQNALSGQLPLAGLTGGVQGTPANQ
PPPLPIPGTGQQQSKPGLGNLFGLLPGGAG
selected fasta
>mammalian cell entry family protein [putative secreted protein]
GTGAAGAAACTCCTGACCGTCGGGGTGCTGGCCACCGTGTCCGCGCTGGCGCTCTCCGGC
TGTGCCTTCAAGGGCATCTACGACCTGCCGCTGCCCGGTGGCGCCGACCTCGGCGACCAC
CCGTACACGGTGAACGTCGAGTTCCGGGACGTGCTCGACCTGACCCCGCAGGCGGGGGTG
AAGGTCGACGAGGTGCCGGTCGGCCGGGTCGAGAACGTCGGGCTCACCAAGGACGGCTGG
CACGCGCTGGTCACCTTGCGGGTCAACGGCGACGTCAAGCTGCCGGCCAACGCGATCGCC
AACGTCAAGCAGTCCAGCCTGCTCGGGGAGAAGTACGTCGAGCTGGCCTCGCCCGGCGCC
GACCAGGCCCACGGCAAGCTCGCCGACAACGCGACCATCCCGCTGGCCCGCACGAACCGC
AGCGTCGAGGTCGAAGAGCTGCTCGGGGCGCTGTCCCTGCTGCTCAACGGCGGTGGCGTC
GACCAGCTGAACACCATCACCAAGGAGCTCAACAACGCCACGTCCGGCCGCGAGCCGGAC
ATCAAGGCGTTGCTGGACAACGCGAACCAGCTGGTGACGAACCTCGACCGGCAGTCGAAG
AACATCACCCGGGCCATCGACGGGCTGAACCGGCTCTCCTCGACCCTCAACGACCAGAAG
GACAAGCTGGTCGGCGCGGTCGACAACCTCGGGCCCGGGCTCGGCGTGCTGGAGCAGCAG
CGCGGCCAGCTGGTCACCATGCTGCAGGCGCTGGACAACCTCTCCGGCGTCGCCACCGAC
ACGGTGAACAAGTCGCAGAAGGACCTCGTCGCCGACCTGAAGGCGCTGACGCCGACGCTG
CAGAAGCTCGGCGAGGCGGGCAACGACCTGCCGAAGGCGCTGGAGATCCTGCTGACTTTC
CCGTTCAGCGACCAGGCCGTCAACGGCGTCAAGGGCGACTACTTCAACCTGTTCGCGAAG
GTGGACCTGAACCTGAAGACCGTCGTGGAGAACCTGGGCAACAGCCGGCAGAACGCCCTG
TCCGGGCAGCTGCCGCTGGCCGGCCTGACCGGCGGGGTGCAGGGCACGCCGGCCAACCAG
CCGCCACCGCTGCCGATCCCCGGCACCGGGCAGCAGCAGTCGAAGCCGGGCCTGGGCAAC
CTCTTCGGGCTCCTGCCGGGAGGTGCGGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR003399 Mammalian cell entry-related (Domain)
 [41-116]  2.2e-14 PF02470
PF02470   MCE
IPR005693 Mammalian cell entry (Family)
 [10-302]  4.6e-70 TIGR00996
TIGR00996   Mtu_fam_mce: virulence factor Mce family protein
IPR024516 Mammalian cell entry, C-terminal (Domain)
 [162-316]  6.9e-08 PF11887
PF11887   DUF3407
SignalP
 [1-24]  0.999 Signal
Bacteria, Gram-negative   
 [1-22]  0.956 Signal
Bacteria, Gram-positive   
 [1-17]  0.996 Signal
Eukaryota   
TMHMM No significant hit