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CDS information : Rifam_00620


close this sectionLocation

Organism
StrainS699
Entry nameRifamycin
Contig
Start / Stop / Direction104,813 / 105,298 / + [in whole cluster]
104,813 / 105,298 / + [in contig]
Location104813..105298 [in whole cluster]
104813..105298 [in contig]
TypeCDS
Length486 bp (161 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF37
Reference
ACC
PmId
[16079331] Identification of tailoring genes involved in the modification of the polyketide backbone of rifamycin B by Amycolatopsis mediterranei S699. (Microbiology. , 2005)

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MTRLAGPVVPRAVGCRDGSDDRVRVAERAPRVLTPPGRAARAPEVRLPQASGRPGGRPAS
RAVGEGAVCPRRAQWCPAPRRWAPRCPRALTPPRAVVPRCAGRARSRRRGRVVPGVSAAR
ARAAGSCVRCAGRTRSRRRGWRAGRGCHRAPSHACAAAGRP
selected fasta
>hypothetical protein [hypothetical protein]
GTGACGCGGCTGGCGGGGCCGGTGGTTCCCCGGGCGGTTGGGTGCCGTGACGGGAGTGAC
GACCGGGTCCGCGTAGCCGAGCGGGCACCAAGGGTGCTCACGCCGCCGGGGAGGGCGGCG
CGGGCCCCGGAGGTCCGGCTGCCCCAGGCTTCGGGGCGGCCGGGTGGTCGGCCGGCGAGC
CGAGCCGTCGGGGAGGGTGCCGTCTGCCCCCGACGGGCTCAGTGGTGTCCGGCGCCTCGG
CGGTGGGCACCGCGGTGTCCACGCGCGCTCACGCCGCCGCGGGCGGTGGTGCCCCGGTGT
GCCGGCCGCGCGCGCTCACGCCGTCGCGGGCGGGTGGTCCCCGGTGTGTCGGCCGCGCGC
GCTCGCGCCGCGGGCAGTTGTGTCCGTTGTGCCGGCCGCACGCGCTCACGCCGCCGTGGG
TGGCGCGCCGGTCGTGGATGCCACCGCGCGCCCTCGCACGCTTGCGCCGCCGCAGGGCGT
CCGTAA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit