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Rubra_00010
CDS information : Rubra_00020
Location
| Organism | Streptomyces achromogenes var. rubradiris |
|---|---|
| Strain | NRRL3061 (=NBRC 14000) |
| Entry name | Rubradirin |
| Contig | AJ871581 |
| Start / Stop / Direction | 2,157 / 1,141 / - [in whole cluster] 2,157 / 1,141 / - [in contig] |
| Location | complement(1141..2157) [in whole cluster] complement(1141..2157) [in contig] |
| Type | CDS |
| Length | 1,017 bp (338 aa) |
Annotation
| Category | 2.3 modification addition of sugar moiety |
|---|---|
| Product | dTDP-glucose 4,6-dehydratase |
| Product (GenBank) | putative TDP-glucose dehydratase |
| Gene | |
| Gene (GenBank) | rubN2 |
| EC number | 4.2.1.46 |
| Keyword |
|
| Note | |
| Note (GenBank) | |
| Reference |
|
Sequence
>dTDP-glucose 4,6-dehydratase [putative TDP-glucose dehydratase] MKLLVTGGAGFIGSHYVRQLLAGGYPGYEQARITVLDVLSYAGRRDNLPVDHPRMDFVQG DICDIPLLLDLLPGHDAVVHFAAESHVDRSVRSAAEFVRTNVAGTQALLEASVRRGISRF VHVSTDEVYGSTDEGSWTEDAPLLPNSPYAASKASADLITRAYWRTHGLDVSITRCSNNY GPYQFPEKLIPLFVTNLMEGKPVPLYGDGYNVREWLHVADHCRAVQAVLTSGGAGEIYNI GGGTGHTNLELTERLLELCGSDRSMIRFVADRKGHDLRYALDDSKIREQLGYSPRVSFDR GLAETVAWYRDNPGWWKTVDGRRAADGEHDTTGGAAPS
>dTDP-glucose 4,6-dehydratase [putative TDP-glucose dehydratase] ATGAAACTCCTGGTAACAGGCGGTGCCGGATTCATCGGCTCGCACTATGTACGGCAACTG CTCGCCGGCGGATATCCCGGCTACGAACAGGCCCGGATCACCGTGCTCGACGTGCTGAGC TACGCCGGACGCAGGGACAACCTGCCGGTCGACCATCCGCGGATGGACTTCGTGCAGGGC GACATCTGCGACATCCCCCTGCTGCTCGACCTGTTGCCGGGCCACGACGCGGTGGTGCAT TTCGCCGCGGAATCGCACGTGGATCGCTCGGTGCGCTCCGCCGCCGAGTTCGTACGGACC AATGTCGCCGGCACCCAGGCCCTCCTGGAGGCGTCTGTGCGCCGTGGCATATCCCGGTTC GTCCATGTCTCGACCGACGAGGTGTACGGCTCGACCGACGAAGGATCGTGGACCGAGGAC GCCCCGCTACTGCCCAACTCGCCCTACGCGGCGTCCAAGGCGAGTGCGGACCTGATCACC CGCGCGTACTGGCGCACCCACGGACTGGACGTGTCCATCACCCGCTGCTCCAACAACTAC GGGCCCTACCAGTTCCCCGAGAAACTGATCCCGCTGTTCGTGACGAACCTCATGGAGGGC AAGCCCGTTCCGCTCTACGGCGATGGATACAACGTGCGCGAGTGGCTGCATGTGGCCGAC CACTGCCGGGCCGTGCAGGCGGTACTCACCTCAGGCGGGGCAGGAGAGATCTACAACATC GGGGGCGGCACGGGCCACACCAACCTGGAGCTCACCGAGCGACTGCTGGAGCTGTGCGGA TCGGACCGCTCGATGATCCGGTTCGTCGCCGACCGCAAGGGCCACGACCTGCGCTACGCA CTCGACGACAGCAAGATCCGCGAGCAGCTGGGGTACAGCCCGCGCGTCTCGTTCGACCGG GGACTGGCCGAGACCGTCGCCTGGTACAGGGACAACCCCGGGTGGTGGAAGACGGTGGAC GGCCGCCGCGCCGCGGACGGGGAGCACGACACCACCGGAGGCGCAGCCCCCTCATGA
Feature
| BLASTP Database:UniProtKB:2010_04 |
|
|---|---|
| InterPro Database:interpro:26.0 |
IPR001509 NAD-dependent epimerase/dehydratase (Domain)
IPR005888 dTDP-glucose 4,6-dehydratase (Family)
IPR016040 NAD(P)-binding domain (Domain)
|
| SignalP |  ![[1-31] 0.127 Signal](/pks/img/R.gif "[1-31] 0.127 Signal"){kind=small} |
| TMHMM | No significant hit |
![[4-241] 5.90000000000008e-67 PF01370](/pks/img/H.gif "[4-241] 5.90000000000008e-67 PF01370"){kind=small}
![[2-319] TIGR01181](/pks/img/T.gif "[2-319] TIGR01181"){kind=small}
![[1-336] 6.3e-108 SSF51735](/pks/img/B.gif "[1-336] 6.3e-108 SSF51735"){kind=small}
![[2-269] 1.19999063421921e-72 G3DSA:3.40.50.720](/pks/img/X2.gif "[2-269] 1.19999063421921e-72 G3DSA:3.40.50.720"){kind=small}
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