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CDS information : Rubra_00350


close this sectionLocation

Organism
StrainNRRL 3061 (=NBRC 14000)
Entry nameRubradirin
Contig
Start / Stop / Direction57,461 / 56,826 / - [in whole cluster]
57,461 / 56,826 / - [in contig]
Locationcomplement(56826..57461) [in whole cluster]
complement(56826..57461) [in contig]
TypeCDS
Length636 bp (211 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF10
Reference
ACC
PmId
[18080113] Biosynthesis of rubradirin as an ansamycin antibiotic from Streptomyces achromogenes var. rubradiris NRRL3061. (Arch Microbiol. , 2008)

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MRILGVSGSLRKESFNTQLLTAVRLLAPAGMEIELFDGIGDLPLYNQDLDTREGSPAPVT
RWRDAVREADGLIIVTPEYNSSIPGVVKNAVDWASRPLMNAALHGKCVVTMVATPGRGLG
RNALTDLGRVLHDCHAQVISGPWVVLTEAEDKLVDVEDEQGRLVPTLCDPSAARLATVQL
NALAAAVDAGAGEHAVAPLRSYFAAGRARNS
selected fasta
>hypothetical protein [hypothetical protein]
TTGCGAATTCTGGGCGTTTCCGGATCGCTTCGCAAAGAGTCGTTCAACACCCAGCTCCTG
ACGGCCGTCAGGCTGTTGGCCCCGGCGGGGATGGAGATCGAGCTCTTCGACGGAATCGGC
GATCTTCCCCTGTACAACCAGGACCTCGACACCCGGGAGGGCAGCCCGGCCCCGGTCACC
CGGTGGCGCGACGCCGTCCGTGAGGCGGACGGTCTGATCATCGTCACACCGGAGTACAAC
AGCTCGATTCCGGGCGTGGTCAAGAACGCGGTCGACTGGGCGTCCCGCCCCCTCATGAAC
GCCGCGTTGCACGGCAAGTGCGTGGTGACCATGGTGGCCACCCCCGGGCGGGGCCTCGGC
CGCAACGCGCTGACCGATCTGGGCCGCGTCCTGCACGACTGCCACGCGCAGGTGATCAGC
GGGCCGTGGGTGGTGCTCACCGAGGCCGAGGACAAGCTCGTCGACGTCGAGGACGAGCAG
GGCCGGCTCGTCCCCACCCTGTGCGACCCGAGCGCCGCGCGTCTTGCCACGGTCCAGTTG
AACGCGCTGGCTGCCGCGGTCGACGCGGGTGCCGGCGAACACGCCGTGGCTCCGCTGCGC
TCCTACTTCGCCGCCGGCCGAGCGCGGAACAGCTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR005025 NADPH-dependent FMN reductase (Domain)
 [1-150]  2.50000000000001e-33 PF03358
PF03358   FMN_red
SignalP No significant hit
TMHMM No significant hit