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CDS information : Salino3_00450


close this sectionLocation

Organism
StrainXM211
Entry nameSalinomycin
Contig
Start / Stop / Direction122,730 / 121,828 / - [in whole cluster]
122,730 / 121,828 / - [in contig]
Locationcomplement(121828..122730) [in whole cluster]
complement(121828..122730) [in contig]
TypeCDS
Length903 bp (300 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category
Product
Product (GenBank)putative sugar transporter membrane protein
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in salinomycin biosynthesis.
Note (GenBank)
  • Orf24

close this sectionSequence

selected fasta
>[putative sugar transporter membrane protein]
MTTAPVKTAAPTAGSPAPRAGRGRPVRWIRRSPLYLAATVTVVLCLFPVYWMVTTAFKPS
QDIQSYDPRLVPGDWTFRHFQDAVSADGFGLFWRNSILVTLSAVLLALLVALGAAYAVAR
LRWRGRRQFMLAVFLAQMAPWESLIIPIYIISRDTDMLDRLPTLTLIYFMITLPFTVVVL
RGFLASIPPELEEAAQVDGCTRLGAFRRVAFPLLAPGLMATSLFGFITAWNEFTYANFLI
IKEQDSRTLPVWLSSFQSTFGTDWGATMAASTLFALPALIIFLVLQRHVTSGLAAGSVKG
selected fasta
>[putative sugar transporter membrane protein]
GTGACCACCGCACCCGTCAAGACGGCCGCGCCCACGGCCGGTTCGCCTGCCCCGCGCGCG
GGCCGCGGCCGGCCGGTCCGCTGGATACGCCGCTCGCCTCTCTACCTGGCGGCGACGGTG
ACCGTGGTGCTGTGCCTGTTCCCCGTCTACTGGATGGTCACCACCGCCTTCAAGCCCTCC
CAGGACATCCAGTCCTACGACCCCCGGCTGGTCCCCGGGGACTGGACCTTCCGCCACTTC
CAGGACGCGGTCTCCGCCGACGGCTTCGGGCTGTTCTGGCGCAACAGCATCCTGGTCACG
CTCAGCGCGGTGCTGCTCGCCCTGCTGGTCGCGCTCGGCGCCGCCTACGCGGTGGCCCGG
CTGCGCTGGCGCGGGCGCAGGCAGTTCATGCTGGCGGTCTTCCTCGCGCAGATGGCGCCC
TGGGAGTCGCTGATCATCCCGATCTACATCATCTCCCGGGACACCGACATGCTCGACCGG
CTGCCCACCCTGACCCTGATCTACTTCATGATCACGCTGCCGTTCACCGTGGTCGTGCTG
CGCGGCTTCCTCGCGAGCATCCCGCCGGAGCTGGAGGAGGCCGCCCAGGTCGACGGCTGC
ACCCGCCTCGGCGCCTTCCGCAGGGTGGCCTTCCCGCTGCTGGCGCCCGGCCTGATGGCC
ACCTCGCTCTTCGGCTTCATCACCGCCTGGAACGAGTTCACCTACGCCAACTTCCTCATC
ATCAAGGAGCAGGACAGCCGGACCCTGCCGGTCTGGCTCTCCTCCTTCCAGTCCACCTTC
GGCACCGACTGGGGAGCGACCATGGCCGCCTCCACCCTCTTCGCGCTCCCGGCGCTGATC
ATCTTCCTCGTCCTCCAGCGGCATGTGACCTCCGGTCTCGCCGCGGGCAGCGTCAAGGGC
TGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000515 Binding-protein-dependent transport systems inner membrane component (Family)
 [112-292]  3.2e-19 PF00528
PF00528   BPD_transp_1
 [93-285]  PS50928
PS50928   ABC_TM1
SignalP No significant hit
TMHMM
 [32-54]  Transmembrane (i-o) [97-116]  Transmembrane (o-i) [129-151]  Transmembrane (i-o) [166-188]  Transmembrane (o-i) [209-231]  Transmembrane (i-o) [264-286]  Transmembrane (o-i)
Transmembrane 6