close all open/close all

CDS information : Salino_00400


close this sectionLocation

Organism
StrainDSM 41398
Entry nameSalinomycin
Contig
Start / Stop / Direction42,009 / 42,647 / + [in whole cluster]
42,009 / 42,647 / + [in contig]
Location42009..42647 [in whole cluster]
42009..42647 [in contig]
TypeCDS
Length639 bp (212 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category
Product
Product (GenBank)lipoprotein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)

close this sectionSequence

selected fasta
>[lipoprotein]
MSENRHAGATADPHETWHGRATNRVQWLLALIGGGCIALGVELAVDSAWNSGNAPLVMSV
VGCIAAGLLVLFGTLAFVHVAVKVDRDHLEIRCGHIGLPRRRIPLDQVVTADFVPTVTPR
HWGGWGYRWRPEKGTAVIVRRGEGVMLMLGDGHIFTITVDDAESAVRIIRDRLRPEPAGS
ASLGPPVRFGRQTPGRTGARSATAPHRRRLPE
selected fasta
>[lipoprotein]
ATGAGCGAGAACCGCCACGCGGGCGCGACCGCCGACCCGCACGAGACCTGGCACGGCAGG
GCCACCAACCGTGTCCAATGGCTGCTCGCCCTGATCGGCGGCGGCTGCATCGCCCTCGGC
GTCGAGCTGGCCGTCGACTCGGCATGGAACTCGGGCAACGCACCCCTGGTGATGTCGGTC
GTCGGCTGCATCGCCGCCGGGCTGCTCGTCCTCTTCGGCACGCTCGCCTTCGTGCACGTC
GCCGTGAAGGTGGACCGCGACCACCTGGAGATCCGCTGCGGGCACATCGGGCTGCCGCGC
CGCCGGATCCCCCTCGACCAGGTCGTCACGGCCGACTTCGTCCCGACCGTCACCCCCCGG
CACTGGGGCGGCTGGGGCTACCGCTGGCGCCCCGAGAAGGGCACCGCCGTGATCGTGCGG
CGCGGTGAGGGCGTCATGCTCATGCTCGGCGACGGGCACATCTTCACCATCACCGTCGAC
GACGCCGAGTCCGCCGTCCGCATCATCCGCGACCGGCTGCGCCCGGAGCCCGCCGGTTCG
GCAAGCCTAGGGCCTCCCGTCCGGTTCGGACGGCAGACCCCAGGCCGGACAGGGGCCCGC
TCCGCGACCGCCCCGCACCGCCGTAGACTCCCCGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-38]  0.348 Signal
Eukaryota   
TMHMM
 [27-45]  Transmembrane (i-o) [60-82]  Transmembrane (o-i)
Transmembrane 2