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CDS information : Salino_00460


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Organism
StrainDSM 41398
Entry nameSalinomycin
Contig
Start / Stop / Direction48,656 / 48,204 / - [in whole cluster]
48,656 / 48,204 / - [in contig]
Locationcomplement(48204..48656) [in whole cluster]
complement(48204..48656) [in contig]
TypeCDS
Length453 bp (150 aa)
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close this sectionAnnotation

Category
Product
Product (GenBank)MarR family transcriptional regulator
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)

close this sectionSequence

selected fasta
>[MarR family transcriptional regulator]
MHQGTEPRTAAAETALRVLHREITALSRRARSTAARTHPELSLVSFTLLSHLEDRGGCTA
TDLAAHYALDKSTVSRQVAALEKAGFVERRVPPEDHRVQVLQLTAKGTAVLGEAMRLRGA
LIRERLADWPEEDLERFAGYLVRYNDAVSG
selected fasta
>[MarR family transcriptional regulator]
ATGCACCAGGGCACCGAGCCGCGCACCGCGGCCGCGGAGACGGCACTGCGGGTGCTGCAC
CGCGAGATCACCGCCCTCTCGCGACGGGCCAGGTCCACCGCGGCCCGCACCCACCCGGAA
CTCTCGCTGGTCTCCTTCACCCTGCTCAGCCATCTGGAGGACCGCGGGGGCTGCACCGCC
ACCGACCTCGCCGCCCACTACGCCCTCGACAAGTCGACGGTCAGCCGCCAGGTCGCCGCC
CTGGAGAAGGCGGGCTTCGTGGAGCGCCGGGTGCCGCCCGAGGACCACCGCGTCCAGGTG
CTCCAGCTGACCGCGAAGGGCACCGCGGTCCTGGGCGAGGCGATGCGGCTGCGCGGGGCG
CTGATCCGCGAGCGCCTCGCCGACTGGCCGGAGGAGGACCTGGAGCGCTTCGCCGGGTAC
CTGGTCCGCTACAACGACGCCGTCAGCGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000835 Transcription regulator HTH, MarR-type (Family)
 [34-134]  7.80000016938413e-15 SM00347
SM00347   HTH_MARR
 [58-74]  2.00000075217457e-06 PR00598 [75-90]  2.00000075217457e-06 PR00598 [94-110]  2.00000075217457e-06 PR00598
PR00598   HTHMARR
 [12-146]  PS50995
PS50995   HTH_MARR_2
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain)
 [13-149]  6.79999999999998e-31 G3DSA:1.10.10.10
G3DSA:1.10.10.10   Wing_hlx_DNA_bd
SignalP No significant hit
TMHMM No significant hit