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CDS information : Soraph_00020


close this sectionLocation

Organism
StrainSo ce26
Entry nameSoraphen
Contig
Start / Stop / Direction1,424 / 6,127 / + [in whole cluster]
1,424 / 6,127 / + [in contig]
Location1424..6127 [in whole cluster]
1424..6127 [in contig]
TypeCDS
Length4,704 bp (1,567 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • hypothetical protein; Orf2
Reference
ACC
PmId
[12039053] Characterization of the biosynthetic gene cluster for the antifungal polyketide soraphen A from Sorangium cellulosum So ce26. (Gene. , 2002)
[15289572] Heterologous production of the antifungal polyketide antibiotic soraphen A of Sorangium cellulosum So ce26 in Streptomyces lividans. (Microbiology. , 2004)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MRSFPKRFNFSPDTWAGPRAATFHRREDAFQQLVGDALREEFGAGVRVMPTEGRDGGIDV
LLENDARLPFVSRDLAGPVIVECKDNDDARGRAFENVRAAWKKVEEKLAKQSAAGWPGTY
RPWATARTYLYLTSAALPNQDARNRLQHDVEQFFQRLRRDGRTTIEHPVVADWTDLCSLL
DRNPRLADRWLGLGRLSLRSQAEQLASLGGVSRYLVDLPFIAPGRESQTHPDRLLAHVLE
RAGEDRGVLLVGAGGVGKTRTLLEVGQRADAQGWRVLHVLSGEPPLSSSDLIQEVVDGRR
DTLVICDYFDQRALDVVSIRQRLLPAARQRGFKVAILASARTPRDARRSRNPDFFAVVRL
ALETEQAQRLAGTMEQQIAPQAVRMLGEEKVRKLTGDQPMIALLVLKELERLAATRKLTR
AQDTTVRPGELRHWLERRLAEDELVADAGSSRWDEEATSHVLGAAAALAFCPARPKHVYA
VITCVIAEENKAKAADQAERIVQNLIELGWLRNAEGKLTVAHDVVTDQLLEQALRTTSDA
VRRHALRRLLRPCAKSPAVLARFATALRRVIAAGGPFMRELERRAQAWLRKASPALGRML
AGASASKSSAALWAMLRGSPWKQTTTACWDQIVAPWLVRHGASSDAWPPLYALCIRKNLP
EPYAARALEAAIAWIEQHHEDEHAASILLMLLDRPDLGSAIASRLFELAWPWYERHRQRP
SAALVLGGLLERTEAPPALIERLGPETLRWWIEHPEVEEAGLPLGMLLRREDTSSALSQR
VEGASWEWLERHRDAQTAGYVLHGLLLTCDEESARWHRAVDAALRWLKIHADTAEGGLVL
GSLLLRGESIPEQLPAVLDAAWAWFKRRRRSFRVSFILPGLLTTSALDPDRFVQAAKIAL
GWVAAYDRYPQARILVHLVSRRGDLDPERAGAIDREACSILQKGPDMSLSGLLLGMLLER
GTLPDDVAARVAELALGWLEKNVGGELHWLVLATSIACPHVDVTDARRLAADAIAQAESG
AVRNVDGAVLGSIIHRIGIETSLLQRASAQMAQWFDGHASDLAAIQAYRLLLGRPDLDPG
LMARLVEGAQLWLEQHGDMLGAVAVIAPLLAREDLTPEIRARAETTAITWLEQHNPRFEA
VDIINVLLATSRTINKPGISIVAAAREWLQWHSRRPLASSLIANLIPPSAEPASPEDIQH
ALSWLEAHGDKPDAFDLLLRLSARRDLSPRSASVVVSTGLSWLSAHPHAELAAPLIYTLL
VRPEIDASVVVQLVSRATDWLDTHELSEASGYALAAVMFAAQRRPELAHSVDGRGPLGAV
EWLRDHASTHIAGPVIALLYSRKNLTRTTLAAAATSVKQWLGEHAHREESLWPLAALLQH
RNLPRGLARRVVQKAVEWIDHHTHVGDAYAILHELFGRDLRDEDFRTVFLAALRWLGEHV
DTPEGQQLLRLVFSQASPEESGATEGQDFVESLVDTLASSVEGEGFEDACRALPALLVEA
ARSRAPALERRARVLVARALRDRRMHRELRRRMAGACQRLLEADAWPDRARALQLLSELG
LAPALED
selected fasta
>hypothetical protein [unknown]
ATGCGCTCCTTCCCCAAGCGGTTCAACTTCAGCCCCGACACCTGGGCCGGTCCGCGCGCG
GCCACGTTCCACCGGCGTGAGGACGCATTCCAGCAGCTCGTGGGCGACGCGCTCCGCGAG
GAGTTCGGGGCCGGCGTCCGCGTCATGCCCACCGAGGGACGGGACGGCGGTATCGACGTG
CTCCTAGAGAACGACGCGCGCCTGCCCTTCGTTTCGCGAGACCTGGCCGGGCCGGTGATC
GTCGAGTGCAAGGACAACGACGACGCCCGTGGACGCGCCTTCGAGAACGTGCGCGCGGCA
TGGAAGAAGGTGGAGGAGAAGCTCGCGAAGCAGTCCGCGGCGGGGTGGCCCGGCACGTAC
CGCCCCTGGGCGACCGCGCGCACGTACCTCTACCTCACGAGCGCGGCGCTACCGAACCAG
GACGCCCGCAACCGGCTCCAGCATGACGTCGAGCAGTTCTTCCAGCGCTTGCGCCGGGAT
GGCAGGACCACGATCGAGCACCCGGTCGTTGCCGACTGGACCGACCTGTGCTCGCTCCTC
GACCGGAACCCGCGCCTCGCCGATCGCTGGCTCGGCCTCGGCCGGCTGTCGCTGCGCTCG
CAAGCGGAGCAGCTCGCCTCCCTCGGGGGCGTGAGCCGTTACCTCGTGGATTTGCCGTTC
ATCGCTCCAGGCCGGGAGAGCCAGACCCATCCTGACCGCCTGCTGGCCCACGTTCTCGAG
CGCGCCGGCGAGGATCGCGGCGTGCTGCTCGTCGGCGCGGGCGGCGTCGGCAAGACCCGG
ACGCTCCTCGAGGTGGGCCAGCGCGCCGATGCCCAAGGGTGGAGAGTGCTCCACGTCCTC
TCGGGCGAGCCGCCGCTGAGCTCCTCGGACCTGATCCAGGAGGTCGTGGACGGGCGACGG
GACACCCTCGTCATCTGCGACTACTTCGATCAGCGCGCCCTTGATGTCGTATCGATTCGA
CAGCGTCTCTTGCCCGCGGCGCGCCAGCGCGGGTTCAAGGTGGCGATCCTCGCCTCTGCG
CGTACGCCGCGCGACGCGCGGCGCAGCAGGAACCCGGACTTTTTCGCCGTTGTGCGTCTC
GCCCTTGAGACGGAGCAGGCGCAGCGCCTCGCAGGCACCATGGAGCAGCAGATCGCCCCT
CAGGCTGTCCGCATGCTGGGGGAGGAGAAGGTTCGCAAGCTCACCGGCGATCAGCCGATG
ATCGCGCTGCTCGTGCTCAAGGAGCTCGAGCGGCTCGCGGCCACGAGGAAGCTCACCCGT
GCGCAGGACACCACGGTCCGGCCCGGCGAGCTCCGCCACTGGCTCGAGCGCCGCCTCGCG
GAGGACGAGCTCGTCGCCGACGCCGGTTCCTCGCGCTGGGACGAGGAGGCGACGTCCCAC
GTCCTCGGCGCCGCAGCAGCGCTGGCGTTCTGCCCAGCGCGCCCGAAGCACGTCTACGCG
GTGATCACCTGCGTCATCGCCGAGGAGAACAAGGCCAAGGCGGCGGACCAGGCGGAGCGA
ATCGTCCAGAACCTCATCGAGCTCGGCTGGCTGCGGAACGCGGAAGGCAAGCTGACGGTC
GCGCACGACGTGGTCACCGATCAGCTGCTCGAACAGGCGCTGCGTACCACGAGCGACGCC
GTGCGCAGGCATGCTCTTCGGCGGTTGCTCCGGCCGTGCGCGAAGTCGCCTGCCGTGCTT
GCGCGGTTCGCGACCGCGCTCCGGCGCGTCATCGCCGCGGGGGGCCCGTTTATGCGGGAG
CTGGAGCGGCGCGCGCAGGCGTGGCTCAGGAAGGCGTCCCCTGCGCTGGGCAGGATGCTC
GCTGGCGCGTCGGCGTCGAAGTCCTCCGCGGCGCTGTGGGCCATGCTCCGTGGATCGCCA
TGGAAGCAGACGACGACCGCGTGCTGGGATCAGATCGTCGCCCCGTGGCTCGTCCGCCAT
GGCGCGTCGAGCGACGCGTGGCCCCCGCTCTACGCCCTCTGCATTCGGAAGAACCTGCCC
GAGCCGTACGCCGCGCGCGCGCTGGAGGCCGCCATCGCCTGGATCGAGCAGCACCACGAG
GACGAGCACGCCGCCAGCATCCTCCTCATGCTCCTCGACCGGCCGGACCTCGGGTCCGCG
ATTGCCTCTCGGCTGTTCGAACTGGCCTGGCCCTGGTATGAGCGGCACCGGCAGAGGCCC
TCGGCAGCGCTCGTGCTCGGCGGGCTCCTCGAGCGCACGGAGGCGCCGCCTGCACTCATC
GAGCGCCTTGGACCGGAGACGCTTCGCTGGTGGATCGAGCACCCGGAGGTCGAAGAGGCC
GGGCTCCCGCTCGGCATGCTGCTCCGGCGAGAGGACACCAGCTCTGCGCTGAGCCAGCGG
GTCGAGGGCGCGTCCTGGGAGTGGCTCGAGCGGCATCGCGACGCGCAGACCGCCGGCTAC
GTCCTCCACGGGCTCTTGCTGACCTGCGACGAAGAATCCGCCCGCTGGCACCGGGCCGTC
GATGCCGCGCTCCGCTGGCTCAAAATCCACGCTGACACCGCAGAGGGCGGGCTCGTGCTC
GGCAGCCTTCTCCTGAGAGGAGAGTCGATCCCGGAGCAGCTTCCCGCCGTGCTCGACGCC
GCGTGGGCATGGTTCAAGCGGCGCAGACGTTCGTTCCGCGTCTCGTTCATCCTGCCCGGG
CTGCTCACGACGAGCGCGCTCGATCCGGACAGGTTCGTTCAGGCGGCGAAGATCGCGCTC
GGCTGGGTCGCGGCCTACGACAGGTATCCACAGGCAAGAATCCTCGTCCACCTGGTCTCC
CGACGCGGCGATCTCGACCCGGAGCGCGCCGGTGCGATCGACCGTGAAGCGTGCAGTATC
CTGCAGAAGGGTCCGGACATGTCACTCTCCGGCCTCCTCCTCGGTATGCTGCTGGAACGC
GGCACGCTGCCCGACGATGTCGCAGCCAGGGTGGCCGAGCTGGCGTTGGGCTGGCTCGAG
AAGAACGTCGGCGGCGAGCTGCACTGGCTGGTGCTGGCAACCAGCATCGCCTGCCCACAC
GTCGACGTCACGGACGCGCGCCGGCTCGCGGCCGACGCCATCGCGCAGGCGGAGTCCGGA
GCTGTACGGAACGTGGACGGCGCGGTGCTGGGGAGCATCATCCACCGCATCGGCATCGAG
ACATCGCTCCTTCAGCGCGCGTCGGCGCAGATGGCGCAGTGGTTCGACGGTCACGCGTCC
GACCTCGCCGCAATCCAGGCCTATCGCCTGCTGCTCGGGCGCCCGGATCTCGATCCGGGC
CTCATGGCGCGACTCGTCGAGGGCGCGCAGCTCTGGCTGGAACAGCACGGCGATATGTTG
GGGGCTGTCGCCGTCATCGCGCCGCTCCTCGCGCGCGAGGACCTGACGCCGGAGATCCGG
GCTCGCGCCGAGACGACGGCGATAACATGGCTCGAGCAGCACAACCCGCGGTTCGAGGCA
GTCGACATCATCAACGTCCTGCTCGCGACATCCCGCACAATAAACAAACCTGGCATTTCG
ATCGTCGCAGCCGCGAGAGAATGGCTGCAATGGCATTCAAGGCGTCCGCTGGCATCGTCG
CTGATAGCGAATCTCATTCCGCCGTCAGCAGAACCGGCCAGCCCAGAGGATATCCAGCAC
GCCCTCTCCTGGCTGGAAGCACACGGCGACAAGCCAGATGCTTTCGATCTTCTGCTGAGG
TTGTCCGCGCGCCGCGACCTGAGCCCGCGCTCCGCGAGCGTCGTGGTCTCCACAGGTCTG
TCCTGGCTCTCCGCTCACCCACACGCGGAGCTGGCCGCACCCCTGATTTACACGCTGTTG
GTCAGACCAGAGATAGACGCATCGGTCGTCGTCCAGCTGGTATCCAGAGCAACCGACTGG
CTCGACACGCACGAGCTCTCGGAGGCCTCCGGATACGCGCTGGCAGCCGTGATGTTCGCC
GCTCAAAGGCGACCAGAACTCGCACACAGCGTCGACGGGCGCGGACCGCTCGGGGCGGTA
GAATGGCTGCGAGACCATGCGAGCACGCACATCGCGGGTCCGGTCATAGCGCTCCTCTAC
AGCAGAAAAAACCTCACAAGGACAACGCTCGCCGCGGCAGCGACGAGCGTGAAACAATGG
CTCGGCGAGCACGCGCACCGGGAAGAGTCATTGTGGCCCCTGGCGGCGCTTCTGCAACAC
AGGAACCTGCCACGCGGACTCGCGAGAAGGGTGGTCCAGAAAGCGGTCGAGTGGATAGAC
CATCACACGCACGTCGGAGACGCCTACGCGATACTACACGAGTTGTTTGGCCGCGATCTG
CGTGACGAAGACTTCCGCACTGTCTTCCTGGCGGCGCTGCGATGGCTCGGGGAACACGTC
GACACTCCGGAGGGCCAGCAACTGTTGCGCCTCGTCTTCAGCCAAGCTTCACCCGAGGAG
AGCGGGGCAACTGAAGGCCAGGACTTTGTCGAGTCGCTCGTGGATACTTTGGCCTCGTCC
GTGGAGGGCGAGGGCTTCGAGGATGCCTGCCGGGCCCTGCCGGCGCTACTCGTGGAGGCT
GCGCGGAGCAGAGCACCAGCGCTGGAGCGAAGAGCTCGGGTCCTGGTTGCGCGAGCGCTC
CGCGACCGGCGGATGCACCGAGAGCTGCGGCGCCGCATGGCCGGGGCGTGTCAACGGCTG
CTCGAGGCGGACGCGTGGCCGGACCGAGCGCGCGCCCTCCAGTTGCTGAGCGAGCTAGGT
TTGGCGCCAGCGCTGGAGGACTAA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP No significant hit
TMHMM No significant hit