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CDS information : Stref_00020


close this sectionLocation

Organism
StrainNRRL 3193 (=NBRC 13446)
Entry nameSteffimycin
Contig
Start / Stop / Direction1,955 / 1,602 / - [in whole cluster]
1,955 / 1,602 / - [in contig]
Locationcomplement(1602..1955) [in whole cluster]
complement(1602..1955) [in contig]
TypeCDS
Length354 bp (117 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in steffimycin biosynthesis.
Note (GenBank)
  • ORF2
Reference
ACC
PmId
[16751529] Isolation, characterization, and heterologous expression of the biosynthesis gene cluster for the antitumor anthracycline steffimycin. (Appl Environ Microbiol. , 2006)

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MPDDPAGRIVVVLDLDGVTDKAGLMDRCARDLALPEWFGRNWDALADSLSDPGLWPEGAG
ERGLLVVVVGWRKYAESRPEEWQVAEEIFAEATDRGPGLFVTLGLGGSSEQARDQPG
selected fasta
>hypothetical protein [hypothetical protein]
GTGCCGGACGACCCGGCGGGCCGGATCGTGGTCGTCCTGGACCTCGACGGGGTCACGGAC
AAGGCGGGCCTCATGGACCGCTGCGCCCGTGACCTGGCCCTGCCCGAGTGGTTCGGCCGC
AACTGGGACGCCCTCGCCGACAGCCTGTCCGACCCCGGCCTGTGGCCCGAGGGCGCCGGG
GAGCGGGGGCTGCTGGTCGTCGTCGTGGGCTGGCGGAAGTATGCCGAGTCGCGTCCCGAG
GAGTGGCAGGTCGCCGAGGAGATCTTCGCCGAGGCGACGGACCGGGGCCCGGGCCTCTTC
GTGACCCTCGGCCTTGGAGGATCCTCCGAACAGGCCCGTGACCAGCCTGGATGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000468 Barstar (barnase inhibitor) (Domain)
 [10-99]  3.09999999999998e-21 G3DSA:3.30.370.10
G3DSA:3.30.370.10   G3DSA:3.30.370.10
 [11-101]  5.80000000000004e-23 PF01337
PF01337   Barstar
 [9-104]  1.39999892049878e-21 SSF52038
SSF52038   SSF52038
SignalP No significant hit
TMHMM No significant hit