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微生物 : Ochrobactrum anthropi

微生物株情報

NBRC番号 15819
学名 Ochrobactrum anthropi
別名(シノニム) 該当データなし
由来 IFO 15819 <- LMG 3331 <- Inst. Pasteur, France (M. Popoff) <- CIP 149-70
他保存機関番号 ATCC 49188=CCUG 24695=CIP 14970=CIP 82.115=DSM 6882=IAM 14119=JCM 21032=LMG 3331=NCTC 12168
他株番号 Popoff Alc 37
参考文献
該当データなし

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseOant_1445
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseOant_3573
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseOant_2501 Oant_1320
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseOant_1320
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseOant_1597
TRPE
(NRULE_0143)
Anthranilate synthase component IOant_1597
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseOant_1470
Arsenical resistance(NFUNC_0004)
必須D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBOant_3198
ARSC1
(NRULE_0017)
Arsenate reductaseOant_2198 Oant_3199
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBOant_3198
ARSC2
(NRULE_0018)
Arsenate reductaseOant_3200
任意 
ARSH
(NRULE_0021)
ArsH proteinOant_3197
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseOant_1339
Beta-lactam antibiotic resistance(NFUNC_0033)
必須C
BLAC
(NRULE_0124)
Beta-lactamase class COant_2585
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseOant_2709
Cephalosporin resistance(NFUNC_0048)
必須A
BLAC
(NRULE_0124)
Beta-lactamase class COant_2585
Kanamycin resistance(NFUNC_0052)
必須C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseOant_1320
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseOant_3160
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinOant_1669 Oant_3851 Oant_3893 Oant_4252 Oant_3457 Oant_3365 Oant_2478 Oant_3753 Oant_3814 Oant_3550
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinOant_4254 Oant_2833 Oant_2485 Oant_0120 Oant_1142 Oant_1854
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueROant_3237 Oant_4049 Oant_0295
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxROant_2950
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinOant_1142 Oant_4254 Oant_1854 Oant_0120 Oant_2833 Oant_2485
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinOant_4253
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinOant_4252
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitOant_3728
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitOant_3727
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomeraseOant_3729
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylaseOant_3726
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseOant_3725
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AOant_3720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BOant_3719
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseOant_4020 Oant_3718
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseOant_2501 Oant_1320
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseOant_1320
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseOant_2713
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseOant_2714
Uptake of osmoprotectant(NFUNC_0061)
必須B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinOant_3465
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinOant_3464
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinOant_3463
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinOant_3462

ゲノム配列情報

BioProject IDPRJNA19485
ローカスタグOANT
INSDC entriesCP000758, CP000759
ステータスComplete
解析状況
コンティグ数6
サイズ(bp) 5,205,777
遺伝子数 4,799
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile opportunistic pathogen and symbiont of several eukaryotic hosts. (J Bacteriol. 2011) PMID: 21685287

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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