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微生物 : Streptosporangium roseum

微生物株情報

NBRC番号 3776
学名 Streptosporangium roseum
別名(シノニム) 該当データなし
由来 IFO 3776 <- NI 9100 <- J.N. Couch, ip-15
他保存機関番号 ATCC 12428=DSM 43021=JCM 3005=NRRL 2505=VKM Ac-807
他株番号
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSros_1141
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseSros_0428
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須C
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseSros_5378
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_3941 Sros_0454 Sros_6646
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
任意 
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSros_0110 Sros_3761
TRPE
(NRULE_0143)
Anthranilate synthase component ISros_3982
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseSros_4014 Sros_5333 Sros_5486
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSros_0789
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
D
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseSros_3854
Freeze resistance (by antifreeze protein)(NFUNC_0019)
必須A
AFP
(NRULE_0089)
Ice-structuring proteinSros_6489
Gentamicin resistance(NFUNC_0053)
必須A
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
Kanamycin resistance(NFUNC_0052)
必須B
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_0454 Sros_6646 Sros_3941
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseSros_0404
D
ERE
(NRULE_0168)
Erythromycin esteraseSros_5057
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseSros_8226
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSros_9032 Sros_9029 Sros_3490
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSros_9031 Sros_2364 Sros_6584 Sros_8236
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSros_3207 Sros_9086 Sros_2489
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSros_2364 Sros_8236 Sros_9031 Sros_6584
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSros_9030
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
B
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseSros_6973
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseSros_2784 Sros_4928
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinSros_6044 Sros_6610 Sros_5985 Sros_3851 Sros_2675 Sros_0513 Sros_6043
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseSros_2092 Sros_6600 Sros_6997 Sros_8176 Sros_8271 Sros_3429
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseSros_5553
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseSros_2835
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Sros_2835
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDSros_2832
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseSros_2836
RIBE
(NRULE_0204)
Riboflavin synthaseSros_2833
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFSros_2129
Streptogramin resistance(NFUNC_0027)
必須B
VGB
(NRULE_0114)
Virginiamycin B lyaseSros_7528
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseSros_5378
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_6646 Sros_0454 Sros_3941
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseSros_1602
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseSros_1603
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeSros_6707 Sros_1601
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseSros_1630 Sros_8141
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseSros_6769
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseSros_8924
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSros_6121
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSros_6117

ゲノム配列情報

BioProject IDPRJNA21083
ローカスタグSROS
INSDC entriesCP001814
ステータスComplete
解析状況
コンティグ数2
サイズ(bp) 10,369,518
遺伝子数 8,975
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Streptosporangium roseum type strain (NI 9100). (Stand Genomic Sci. 2010) PMID: 21304675

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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FASTA
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