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微生物 : Streptomyces pristinaespiralis

微生物株情報

NBRC番号 13074
学名 Streptomyces pristinaespiralis
別名(シノニム) 該当データなし
由来 IFO 13074 <- SAJ <- OWU (ISP 5338) <- NRRL 2958 <- Rhone-Poulenc 5647
他保存機関番号 AS 4.1352=ATCC 25486=BCRC 12096=CBS 914.69=DSM 40338=ISP 5338=JCM 4507=NBRC 13074=NRRL 2958=RIA 1266
他株番号
参考文献
9303382
Streptogramin B biosynthesis in Streptomyces pristinaespiralis and Streptomyces virginiae: molecular characterization of the last structural peptide synthetase gene. (Antimicrob Agents Chemother. 1997)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSSDG_06416
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseSSDG_01074
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseSSDG_01997
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseSSDG_06156
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSDG_05985 SSDG_02287
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSSDG_07483 SSDG_06555
TRPE
(NRULE_0143)
Anthranilate synthase component ISSDG_07081
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSSDG_00968
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSDG_05985 SSDG_02287
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseSSDG_01561 SSDG_06535
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSSDG_07154
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSSDG_07155
ECTC
(NRULE_0188)
L-ectoine synthaseSSDG_07153
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseSSDG_04918
O-Glycan degradation(NFUNC_0084)
必須A
ENGBF
(NRULE_0257)
Endo-alpha-N-acetylgalactosaminidaseSSDG_06180
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseSSDG_07152
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSSDG_07154
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSSDG_07155
 
ECTC
(NRULE_0188)
L-ectoine synthaseSSDG_07153
Macrolide antibiotic resistance(NFUNC_0045)
必須D
ERE
(NRULE_0168)
Erythromycin esteraseSSDG_02687 SSDG_01936
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseSSDG_00724
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSSDG_00350 SSDG_06011
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSSDG_06010 SSDG_05580 SSDG_03126 SSDG_04586 SSDG_06039
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSSDG_01940
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSSDG_05580 SSDG_03126 SSDG_04586 SSDG_06039 SSDG_06010
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSSDG_06009
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseSSDG_02625
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseSSDG_05164
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseSSDG_04656
PANC
(NRULE_0118)
Pantothenate synthetaseSSDG_06469
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSDG_02287 SSDG_05985
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseSSDG_05191
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseSSDG_03624
RIBA
(NRULE_0201)
GTP cyclohydrolase-2SSDG_03624
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDSSDG_03622
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseSSDG_03625
RIBE
(NRULE_0204)
Riboflavin synthaseSSDG_03623
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFSSDG_03723
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseSSDG_06156
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseSSDG_00713
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseSSDG_00707
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeSSDG_00715 SSDG_05563
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseSSDG_06215
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterSSDG_00125
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSSDG_04338
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSSDG_04339

ゲノム配列情報

BioProject IDPRJNA28553
ローカスタグSSDG
INSDC entriesABJI02000000
ステータスWGS
解析状況
コンティグ数844
サイズ(bp) 7,633,609
遺伝子数 6,869
フィニッシングゴール
アセンブル方法Arachne v. April 2007
冗長度9.5x
シーケンス方法
  • ABI
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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