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微生物 : Streptomyces venezuelae

微生物株情報

NBRC番号 13096
学名 Streptomyces venezuelae
別名(シノニム) 該当データなし
由来 IFO 13096 <- SAJ <- OWU (ISP 5230) <- Park Davies & Co. (L. Anderson, PD 04745) <- P. R. Burkholder, A-65, ETH 26169
他保存機関番号 ATCC 10712=ATCC 25508=BCRC 11512=CBS 650.69=DSM 40230=ISP 5230=JCM 4526=LMG 19308=NBRC 12595=NRRL 2277=RIA 1288=RIA 70=VKM Ac-589
他株番号
参考文献
2040427
Molecular cloning of the genes for anthranilate synthetase from Streptomyces venezuelae ISP 5230. (FEMS Microbiol Lett. 1991)
20351769
Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights. (PLoS Biol. 2010)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSVEN_4422
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseSVEN_6655
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須D
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferaseSVEN_0221
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseSVEN_4018 SVEN_5355
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseSVEN_5979
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASVEN_0089
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSVEN_0920 SVEN_3635 SVEN_6249
TRPE
(NRULE_0143)
Anthranilate synthase component ISVEN_1696
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSVEN_0893
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASVEN_0089
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSVEN_0227
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSVEN_0226
ECTC
(NRULE_0188)
L-ectoine synthaseSVEN_0228
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseSVEN_3266
O-Glycan degradation(NFUNC_0084)
必須A
ENGBF
(NRULE_0257)
Endo-alpha-N-acetylgalactosaminidaseSVEN_5220
Hyaluronan degradation(NFUNC_0069)
必須A
HYSA
(NRULE_0232)
Hyaluronate lyaseSVEN_5221
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseSVEN_0229
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSVEN_0227
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSVEN_0226
 
ECTC
(NRULE_0188)
L-ectoine synthaseSVEN_0228
Hygromycin resistance(NFUNC_0055)
必須A
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseSVEN_5979
Macrolide antibiotic resistance(NFUNC_0045)
必須D
ERE
(NRULE_0168)
Erythromycin esteraseSVEN_1297 SVEN_0251
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseSVEN_0189
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSVEN_6046 SVEN_6048 SVEN_0751 SVEN_2622
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSVEN_2734 SVEN_6620 SVEN_6047 SVEN_1452 SVEN_1422 SVEN_1370
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSVEN_1301
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSVEN_6047 SVEN_6620 SVEN_1370 SVEN_1422 SVEN_1452 SVEN_2734
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSVEN_6048
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseSVEN_6802
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseSVEN_1941
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseSVEN_6662
PANC
(NRULE_0118)
Pantothenate synthetaseSVEN_3233
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASVEN_0089
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseSVEN_5100
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseSVEN_1765
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentSVEN_3617 SVEN_0113 SVEN_1320
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinSVEN_1318 SVEN_0942 SVEN_0111 SVEN_1395 SVEN_0749 SVEN_1554 SVEN_1586 SVEN_1806 SVEN_3038 SVEN_7248
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseSVEN_0723 SVEN_0155 SVEN_0489 SVEN_0894 SVEN_4033 SVEN_4243 SVEN_6227
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseSVEN_0101
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseSVEN_1038
RIBA
(NRULE_0201)
GTP cyclohydrolase-2SVEN_1038
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDSVEN_1041
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseSVEN_1037
RIBE
(NRULE_0204)
Riboflavin synthaseSVEN_1040
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFSVEN_5365
Streptomycin resistance(NFUNC_0054)
必須B
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferaseSVEN_0221
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseSVEN_4018 SVEN_5355
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseSVEN_5896
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseSVEN_5890
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeSVEN_5898 SVEN_5112
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseSVEN_5096
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterSVEN_6291 SVEN_7084
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSVEN_1123
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSVEN_1122

ゲノム配列情報

BioProject IDPRJNA62209
ローカスタグSVEN
INSDC entriesFR845719
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 8,226,158
遺伝子数 7,453
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes. (BMC Genomics. 2011) PMID: 21463507

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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