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微生物 : Corynebacterium callunae

微生物株情報

NBRC番号 15359
学名 Corynebacterium callunae
別名(シノニム) 該当データなし
由来 IFO 15359 <- ATCC 15991 <- NRRL B-2244 <- Int. Mineral & Chem. Co.
他保存機関番号 ATCC 15991=CCUG 28793=CIP 104277=DSM 20147=HAMBI 2053=JCM 9489=NRRL B-2244
他株番号
参考文献
該当データなし

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseH924_02815
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseH924_12725 H924_04680
TRPE
(NRULE_0143)
Anthranilate synthase component IH924_12720
Arsenical resistance(NFUNC_0004)
必須D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBH924_01130
ARSC1
(NRULE_0017)
Arsenate reductaseH924_05150
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseH924_06940
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunitH924_10120
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunitH924_10125
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseH924_10135
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer componentH924_10130
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentH924_10130
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinH924_10120 H924_12780 H924_09235
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseH924_10115
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomeraseH924_10110
CATC
(NRULE_0054)
Muconolactone isomeraseH924_10105
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseH924_10070
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AH924_10055
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BH924_10050
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseH924_10065
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseH924_10115
CATC
(NRULE_0054)
Muconolactone isomeraseH924_10105
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseH924_10070
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AH924_10055
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BH924_10050
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseH924_10065
CATB1
(NRULE_0386)
Muconate cycloisomeraseH924_10110
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseH924_05255
Metal-binding protein(NFUNC_0105)
必須C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinH924_10345
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinH924_10345
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseH924_00755
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseH924_00685
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseH924_05125
PANC
(NRULE_0118)
Pantothenate synthetaseH924_00680
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitH924_10090
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitH924_10095
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomeraseH924_10085
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylaseH924_10080
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseH924_10070
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AH924_10055
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BH924_10050
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseH924_10065
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseH924_08895
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseH924_08930
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeH924_08870
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseH924_09700
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseH924_11075
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseH924_11085
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterH924_04260 H924_09810
E
OPUE
(NRULE_0222)
Sodium/proline symporterH924_05475
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSH924_03585
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTH924_03590

ゲノム配列情報

BioProject IDPRJNA190670
ローカスタグH924
INSDC entriesCP004354
ステータスComplete
解析状況
コンティグ数3
サイズ(bp) 2,928,683
遺伝子数 2,647
フィニッシングゴール
アセンブル方法Newbler v. 2.8
冗長度
シーケンス方法
  • Illumina
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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FASTA
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