Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | Swit_0013 Swit_0807 |
n-alkane hydroxylation(NFUNC_0008) |
必須 | A | CYP153 (NRULE_0041) | Cytochrome P450 CYP153 | |
B | ALKB (NRULE_0024) | Alkane 1-monooxygenase | |
C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_3096 Swit_1434 Swit_0757 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
任意 | | RUBA (NRULE_0039) | Rubredoxin | |
| RUBB (NRULE_0040) | Rubredoxin reductase | |
| MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_2239 Swit_2251 Swit_3396 Swit_3409 Swit_3410 Swit_3413 Swit_3416 Swit_4174 Swit_4897 Swit_2253 Swit_2260 Swit_2261 Swit_4188 Swit_4269 Swit_4273 Swit_4278 Swit_4280 Swit_4297 Swit_2271 Swit_4150 Swit_0324 Swit_3307 Swit_0336 Swit_0504 Swit_0538 Swit_0672 Swit_0744 Swit_0837 Swit_0890 Swit_0893 Swit_0896 Swit_0932 Swit_0962 Swit_0966 Swit_0969 Swit_4621 Swit_0973 Swit_1067 Swit_1396 Swit_4861 Swit_1531 Swit_1541 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_3266 Swit_3264 Swit_3062 Swit_3056 Swit_3024 Swit_2634 Swit_2521 Swit_2502 Swit_2310 Swit_2285 Swit_1552 Swit_1559 Swit_1686 Swit_1687 Swit_1708 Swit_1758 Swit_1829 Swit_1874 Swit_1987 Swit_1988 Swit_2034 Swit_2053 |
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043) |
必須 | A | APH6 (NRULE_0155) | Streptomycin 6-kinase | Swit_2677 |
B | APH3 (NRULE_0156) | Aminoglycoside 3'-phosphotransferase | |
C | APH7 (NRULE_0157) | Hygromycin-B 7''-O-kinase | |
D | HPH (NRULE_0174) | Hygromycin-B 4-O-kinase | |
Aniline degradation (conversion into catechol)(NFUNC_0075) |
必須 | A | ATDA1 (NRULE_0240) | Gamma-glutamylanilide synthetase | |
ATDA3 (NRULE_0357) | Aniline dioxygenase large subunit | |
ATDA4 (NRULE_0358) | Aniline dioxygenase small subunit | |
任意 | | ATDA2 (NRULE_0241) | Putative gamma-glutamylanilide hydrolase | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_0757 Swit_1434 Swit_3096 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_4174 Swit_4897 Swit_4861 Swit_4621 Swit_4297 Swit_4280 Swit_4278 Swit_4273 Swit_4269 Swit_4188 Swit_4150 Swit_3416 Swit_3413 Swit_3410 Swit_3409 Swit_3396 Swit_3307 Swit_3266 Swit_3264 Swit_3062 Swit_3056 Swit_3024 Swit_2634 Swit_2521 Swit_2502 Swit_2310 Swit_2285 Swit_2271 Swit_2261 Swit_2260 Swit_2253 Swit_2251 Swit_2239 Swit_2053 Swit_2034 Swit_1988 Swit_1987 Swit_1874 Swit_1829 Swit_1758 Swit_1708 Swit_1687 Swit_1686 Swit_1559 Swit_1552 Swit_1550 Swit_1549 Swit_1543 Swit_1542 Swit_1541 Swit_1531 Swit_1396 Swit_1067 Swit_0973 Swit_0969 Swit_0966 Swit_0962 Swit_0932 Swit_0896 Swit_0893 Swit_0890 Swit_0837 Swit_0744 Swit_0672 Swit_0538 Swit_0504 Swit_0336 Swit_0324 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_2055 Swit_0898 Swit_4920 |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | Swit_3227 |
TRPE (NRULE_0143) | Anthranilate synthase component I | Swit_2352 |
Anthranilate degradation (via hydroxylation)(NFUNC_0018) |
必須 | A | ANTA (NRULE_0044) | Anthranilate 1,2-dioxygenase large subunit | |
ANTB (NRULE_0045) | Anthranilate 1,2-dioxygenase small subunit | |
任意 | | ANTC (NRULE_0081) | Anthranilate 1,2-dioxygenase electron transfer component | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_0757 Swit_1434 Swit_3096 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_1552 Swit_1549 Swit_1543 Swit_1542 Swit_1541 Swit_1531 Swit_1396 Swit_1067 Swit_0973 Swit_0969 Swit_0744 Swit_0672 Swit_0538 Swit_0504 Swit_0336 Swit_0324 Swit_4897 Swit_4861 Swit_4621 Swit_4297 Swit_4280 Swit_4278 Swit_4273 Swit_4269 Swit_4188 Swit_4174 Swit_4150 Swit_3416 Swit_3413 Swit_3410 Swit_3409 Swit_3396 Swit_3307 Swit_3266 Swit_3264 Swit_3062 Swit_3056 Swit_3024 Swit_2634 Swit_2521 Swit_2502 Swit_2310 Swit_2285 Swit_2271 Swit_2261 Swit_2260 Swit_2253 Swit_2251 Swit_2239 Swit_2053 Swit_2034 Swit_1988 Swit_1987 Swit_1874 Swit_1829 Swit_1758 Swit_1708 Swit_1687 Swit_1686 Swit_1559 Swit_1550 Swit_0966 Swit_0962 Swit_0932 Swit_0896 Swit_0893 Swit_0890 Swit_0837 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_0898 Swit_2055 Swit_4920 |
Arginine degradation(NFUNC_0074) |
必須 | A | ARGI (NRULE_0239) | Arginase | Swit_1051 |
Aromatic azo compounds degradation(NFUNC_0073) |
必須 | A | AZOR (NRULE_0236) | FMN-dependent NADH-azoreductase | Swit_2282 Swit_2250 |
B | AZR (NRULE_0237) | NADPH azoreductase | |
C | AZOB (NRULE_0238) | NAD(P)H azoreductase | |
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016) |
必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | Swit_2634 Swit_3056 Swit_4150 Swit_1531 Swit_4188 Swit_4280 Swit_4621 Swit_4897 Swit_4174 Swit_1559 Swit_1758 Swit_1874 Swit_1988 Swit_2253 Swit_2260 Swit_2261 Swit_2271 Swit_0896 Swit_0890 Swit_0744 Swit_0538 Swit_0324 Swit_0336 Swit_0973 Swit_0966 Swit_0962 Swit_0932 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | Swit_1875 Swit_1757 Swit_1532 Swit_0889 Swit_0895 Swit_4189 Swit_4281 Swit_4896 Swit_4175 Swit_3057 Swit_2635 Swit_0743 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_3096 Swit_1434 Swit_0757 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_2251 Swit_0324 Swit_0336 Swit_0504 Swit_0538 Swit_0672 Swit_0744 Swit_0837 Swit_0890 Swit_0893 Swit_0896 Swit_0932 Swit_0962 Swit_0966 Swit_0969 Swit_0973 Swit_1067 Swit_1396 Swit_1531 Swit_1541 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_1552 Swit_1559 Swit_1686 Swit_1687 Swit_1708 Swit_1758 Swit_1829 Swit_1874 Swit_1987 Swit_1988 Swit_2034 Swit_2053 Swit_2239 Swit_2253 Swit_2260 Swit_2261 Swit_2271 Swit_2285 Swit_2310 Swit_2502 Swit_2521 Swit_2634 Swit_3024 Swit_3056 Swit_3062 Swit_3264 Swit_3266 Swit_3307 Swit_3396 Swit_3409 Swit_3410 Swit_3413 Swit_3416 Swit_4150 Swit_4174 Swit_4188 Swit_4269 Swit_4273 Swit_4278 Swit_4280 Swit_4297 Swit_4621 Swit_4861 Swit_4897 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_2055 Swit_0898 Swit_4920 |
Arsenical resistance(NFUNC_0004) |
必須 | A | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC1 (NRULE_0017) | Arsenate reductase | Swit_2243 Swit_4697 |
B | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC2 (NRULE_0018) | Arsenate reductase | |
C | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC3 (NRULE_0019) | Arsenate reductase | |
D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC1 (NRULE_0017) | Arsenate reductase | Swit_4697 Swit_2243 |
E | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC2 (NRULE_0018) | Arsenate reductase | |
F | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC3 (NRULE_0019) | Arsenate reductase | |
任意 | | ARSA (NRULE_0014) | Arsenical pump-driving ATPase | |
| ARSD (NRULE_0020) | Arsenical resistance operon trans-acting repressor ArsD | |
| ARSH (NRULE_0021) | ArsH protein | Swit_2241 |
Artificial lacto-N-biose biosynthesis(NFUNC_0026) |
必須 | A | SP (NRULE_0109) | Sucrose phosphorylase | |
GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | |
GALE (NRULE_0111) | UDP-glucose 4-epimerase | Swit_2978 |
LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | Swit_0660 |
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017) |
必須 | A | BENA (NRULE_0046) | Benzoate 1,2-dioxygenase alpha subunit | |
BENB (NRULE_0047) | Benzoate 1,2-dioxygenase beta subunit | Swit_2635 |
BEND (NRULE_0082) | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | Swit_2636 Swit_5024 |
任意 | | BENC (NRULE_0055) | Benzoate 1,2-dioxygenase electron transfer component | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_0757 Swit_3096 Swit_1434 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_3056 Swit_3062 Swit_3264 Swit_3266 Swit_3307 Swit_3396 Swit_3409 Swit_3410 Swit_3413 Swit_3416 Swit_4150 Swit_4174 Swit_4188 Swit_4269 Swit_4273 Swit_4278 Swit_4280 Swit_4297 Swit_4621 Swit_4861 Swit_4897 Swit_0969 Swit_0966 Swit_0962 Swit_0932 Swit_0896 Swit_0893 Swit_0890 Swit_0837 Swit_0744 Swit_0672 Swit_0538 Swit_0504 Swit_0324 Swit_0973 Swit_0336 Swit_1067 Swit_1396 Swit_1531 Swit_1541 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_1552 Swit_1559 Swit_1686 Swit_1687 Swit_1708 Swit_1758 Swit_1829 Swit_1874 Swit_1987 Swit_1988 Swit_2034 Swit_2053 Swit_2239 Swit_2251 Swit_2253 Swit_2260 Swit_2261 Swit_2271 Swit_2285 Swit_2310 Swit_2502 Swit_2521 Swit_2634 Swit_3024 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_0898 Swit_2055 Swit_4920 |
Bioplastic degradation(NFUNC_0015) |
必須 | A | PHAZ1 (NRULE_0023) | Intracellular poly(3-hydroxyalkanoate) depolymerase | Swit_0645 |
B | PHAZ2 (NRULE_0080) | Poly(3-hydroxyalkanoate) depolymerase | |
C | PHAZ3 (NRULE_0088) | Poly(3-hydroxyalkanoate) depolymerase | |
任意 | | PHAY (NRULE_0022) | D-(-)-3-hydroxybutyrate oligomer hydrolase | |
Bioplastic synthesis(NFUNC_0001) |
必須 | A | PHAC1 (NRULE_0010) | Poly(3-hydroxyalkanoate) polymerase | Swit_0863 |
B | PHAE (NRULE_0012) | Poly(3-hydroxyalkanoate) polymerase PhaE subunit | |
PHAC2 (NRULE_0373) | Poly(3-hydroxyalkanoate) polymerase PhaC subunit | |
C | PHAR (NRULE_0013) | Poly(3-hydroxyalkanoate) polymerase PhaR subunit | |
PHAC2 (NRULE_0373) | Poly(3-hydroxyalkanoate) polymerase PhaC subunit | |
任意 | | PHAB (NRULE_0011) | Acetoacetyl-CoA reductase | Swit_4599 |
| PHAP1 (NRULE_0374) | Phasin | |
| PHAP2 (NRULE_0375) | Phasin | |
| PHAP3 (NRULE_0376) | Phasin | |
| PHAF (NRULE_0377) | Phasin PhaF | |
| PHAI (NRULE_0378) | Phasin PhaI | |
Biotin biosynthesis(NFUNC_0051) |
必須 | A | BIOF (NRULE_0182) | 8-amino-7-oxononanoate synthase | |
BIOA (NRULE_0183) | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | Swit_1256 |
BIOD (NRULE_0184) | ATP-dependent dethiobiotin synthetase BioD | Swit_1255 |
BIOB (NRULE_0185) | Biotin synthase | Swit_2890 |
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013) |
必須 | A | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | Swit_0977 |
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | Swit_0975 |
CATC (NRULE_0054) | Muconolactone isomerase | Swit_0976 |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | Swit_1070 Swit_0978 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_4336 Swit_0752 Swit_5019 Swit_4887 |
B | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | Swit_0977 |
CATC (NRULE_0054) | Muconolactone isomerase | Swit_0976 |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | Swit_1070 Swit_0978 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_4336 Swit_4887 Swit_5019 Swit_0752 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | Swit_0975 |
C | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | Swit_0977 |
CATC (NRULE_0054) | Muconolactone isomerase | Swit_0976 |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_0752 Swit_4887 Swit_5019 Swit_4336 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | Swit_0975 |
D | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | Swit_0977 |
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | Swit_0975 |
CATC (NRULE_0054) | Muconolactone isomerase | Swit_0976 |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_4336 Swit_5019 Swit_0752 Swit_4887 |
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104) |
必須 | A | PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_5019 Swit_0752 Swit_4336 Swit_4887 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | Swit_0846 Swit_1112 Swit_1497 Swit_2080 Swit_2842 Swit_3021 Swit_3134 Swit_3858 Swit_4133 Swit_4157 Swit_4244 Swit_0027 |
CLCE (NRULE_0384) | Maleylacetate reductase | Swit_5062 Swit_4891 |
CLCB (NRULE_0387) | Chloromuconate cycloisomerase | |
B | CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | Swit_0975 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_4336 Swit_5019 Swit_0752 Swit_4887 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | Swit_4244 Swit_3858 Swit_3134 Swit_3021 Swit_2842 Swit_2080 Swit_1497 Swit_1112 Swit_0846 Swit_0027 Swit_4157 Swit_4133 |
CLCE (NRULE_0384) | Maleylacetate reductase | Swit_5062 Swit_4891 |
任意 | | CLCF (NRULE_0385) | Chloromuconolactone dehalogenase | |
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029) |
必須 | A | DSZA (NRULE_0103) | Dibenzothiophene-5,5-dioxide monooxygenase | |
DSZB (NRULE_0104) | 2'-hydroxybiphenyl-2-sulfinate desulfinase | |
DSZC (NRULE_0105) | Dibenzothiophene monooxygenase | |
任意 | | FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_1899 Swit_4267 Swit_4109 |
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011) |
必須 | A | EDIO (NRULE_0058) | extradiol dioxygenase | Swit_1538 Swit_0894 Swit_4902 Swit_4311 Swit_4182 Swit_3407 Swit_3298 Swit_3064 Swit_3046 Swit_2867 Swit_1756 Swit_1041 |
METAH (NRULE_0059) | meta-cleavage compound hydrolase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | Swit_4923 Swit_1641 Swit_2113 |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | Swit_1640 Swit_4924 Swit_2112 |
B | EDIO (NRULE_0058) | extradiol dioxygenase | Swit_2867 Swit_4182 Swit_4311 Swit_4902 Swit_1041 Swit_3046 Swit_0894 Swit_1756 Swit_1538 Swit_3064 Swit_3298 Swit_3407 |
2HMSD (NRULE_0060) | 2-hydroxymuconic semialdehyde dehydrogenase | Swit_3519 |
4OT (NRULE_0061) | 4-oxalocrotonate tautomerase | |
4OD (NRULE_0062) | 4-oxalocrotonate decarboxylase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | Swit_4923 Swit_1641 Swit_2113 |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | Swit_2112 Swit_4924 Swit_1640 |
Folate biosynthesis(NFUNC_0044) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | Swit_3227 |
DHPS (NRULE_0144) | Dihydropteroate synthase | Swit_4577 |
FOLM (NRULE_0146) | Dihydrofolate reductase FolM | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | Swit_4785 Swit_0115 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | Swit_1215 |
FOLC (NRULE_0160) | Bifunctional protein FolC | Swit_2729 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
B | GLAT (NRULE_0142) | Glutamine amidotransferase | Swit_3227 |
DHPS (NRULE_0144) | Dihydropteroate synthase | Swit_4577 |
FOLA (NRULE_0147) | Dihydrofolate reductase | Swit_3786 |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | Swit_0115 Swit_4785 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | Swit_1215 |
FOLC (NRULE_0160) | Bifunctional protein FolC | Swit_2729 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
C | GLAT (NRULE_0142) | Glutamine amidotransferase | Swit_3227 |
DHPS (NRULE_0144) | Dihydropteroate synthase | Swit_4577 |
DFR2 (NRULE_0148) | Dihydrofolate reductase type 2 | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | Swit_0115 Swit_4785 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | Swit_1215 |
FOLC (NRULE_0160) | Bifunctional protein FolC | Swit_2729 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
Human milk oligosaccharides metabolism(NFUNC_0083) |
必須 | A | LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
任意 | | NAHK (NRULE_0256) | N-acetylhexosamine 1-kinase | |
| GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | |
| GALE (NRULE_0111) | UDP-glucose 4-epimerase | Swit_2978 |
4-hydroxyphenylacetate degradation(NFUNC_0068) |
必須 | A | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_3088 Swit_4271 Swit_4313 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_3087 Swit_4270 |
B | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_3088 Swit_4313 Swit_4271 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_3087 Swit_4270 |
C | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_4109 Swit_1899 Swit_4267 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_3088 Swit_4271 Swit_4313 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_4270 Swit_3087 |
D | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_4267 Swit_1899 Swit_4109 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_4271 Swit_3088 Swit_4313 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_4270 Swit_3087 |
E | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_1899 Swit_4267 Swit_4109 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_4313 Swit_3088 Swit_4271 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_3087 Swit_4270 |
F | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_4109 Swit_1899 Swit_4267 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_4313 Swit_3088 Swit_4271 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_3087 Swit_4270 |
G | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_4271 Swit_3088 Swit_4313 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_4270 Swit_3087 |
H | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | Swit_4305 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | Swit_4312 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | Swit_3088 Swit_4271 Swit_4313 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | Swit_3087 Swit_4270 |
Macrolide antibiotic resistance(NFUNC_0045) |
必須 | A | ERM (NRULE_0164) | rRNA adenine N-6-methyltransferase | |
B | RLMA (NRULE_0165) | 23S rRNA (guanine-N(1))-methyltransferase | |
C | MACA (NRULE_0166) | Macrolide-specific efflux protein MacA | |
MACB (NRULE_0167) | Macrolide export ATP-binding/permease protein MacB | |
D | ERE (NRULE_0168) | Erythromycin esterase | Swit_1817 |
E | MPH (NRULE_0169) | Macrolide 2'-phosphotransferase | |
F | MGT (NRULE_0170) | Macrolide glycosyltransferase | |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | |
B | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | Swit_1381 Swit_4418 |
D | MNTR (NRULE_0327) | DtxR family transcriptional regulator MntR | |
E | CUER (NRULE_0328) | Copper-responsive transcriptional regulator CueR | |
F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | |
G | ZNTR (NRULE_0330) | Zinc-responsive transcriptional regulator ZntR | |
H | NIKR (NRULE_0331) | Nickel-responsive transcriptional regulator NikR | |
I | ISCR (NRULE_0332) | Rrf2 family transcriptional regulator IscR | |
J | SMTA (NRULE_0009) | Metallothionein | |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | Swit_1381 Swit_4418 |
任意 | | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
| MODB (NRULE_0325) | Molybdate ABC transporter permease protein | Swit_4417 |
| MODC (NRULE_0326) | Molybdate ABC transporter ATP-binding protein | Swit_4416 |
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067) |
必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | Swit_2271 Swit_0324 Swit_0336 Swit_0538 Swit_0744 Swit_0890 Swit_0896 Swit_0932 Swit_0962 Swit_0966 Swit_0973 Swit_1531 Swit_1559 Swit_1758 Swit_1874 Swit_1988 Swit_2253 Swit_2260 Swit_2261 Swit_2634 Swit_3056 Swit_4150 Swit_4174 Swit_4188 Swit_4280 Swit_4621 Swit_4897 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | Swit_1875 Swit_2635 Swit_3057 Swit_4175 Swit_4189 Swit_4281 Swit_4896 Swit_1757 Swit_1532 Swit_0895 Swit_0889 Swit_0743 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | Swit_1041 Swit_0894 Swit_3046 Swit_2867 Swit_4902 Swit_4311 Swit_4182 Swit_3407 Swit_3298 Swit_3064 Swit_1756 Swit_1538 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAHG (NRULE_0190) | Salicylate hydroxylase | |
B | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | Swit_1559 Swit_2260 Swit_2261 Swit_2271 Swit_2634 Swit_3056 Swit_4150 Swit_4174 Swit_4188 Swit_4280 Swit_0336 Swit_4621 Swit_4897 Swit_2253 Swit_1758 Swit_1874 Swit_0324 Swit_1988 Swit_0538 Swit_0744 Swit_0890 Swit_0896 Swit_0932 Swit_0962 Swit_0966 Swit_0973 Swit_1531 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | Swit_4175 Swit_4281 Swit_4896 Swit_2635 Swit_3057 Swit_4189 Swit_0743 Swit_0889 Swit_0895 Swit_1532 Swit_1757 Swit_1875 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | Swit_1538 Swit_0894 Swit_1041 Swit_1756 Swit_2867 Swit_3046 Swit_3064 Swit_3298 Swit_3407 Swit_4182 Swit_4311 Swit_4902 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAGG (NRULE_0191) | Salicylate 5-hydroxylase alpha subunit | Swit_3056 |
NAGH (NRULE_0192) | Salicylate 5-hydroxylase beta subunit | Swit_3057 |
任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_3096 Swit_0757 Swit_1434 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_0890 Swit_1559 Swit_3264 Swit_3266 Swit_1686 Swit_3307 Swit_3396 Swit_4174 Swit_4150 Swit_3409 Swit_3410 Swit_3413 Swit_3416 Swit_1541 Swit_1531 Swit_1396 Swit_1067 Swit_0973 Swit_0969 Swit_0966 Swit_0962 Swit_0932 Swit_0896 Swit_0893 Swit_0837 Swit_0744 Swit_0672 Swit_0538 Swit_0504 Swit_0336 Swit_0324 Swit_4273 Swit_4278 Swit_4280 Swit_4297 Swit_4621 Swit_4861 Swit_4897 Swit_1687 Swit_1708 Swit_1758 Swit_1829 Swit_1874 Swit_1987 Swit_1988 Swit_2034 Swit_2053 Swit_2253 Swit_2260 Swit_2261 Swit_2271 Swit_2285 Swit_2310 Swit_2502 Swit_2521 Swit_2634 Swit_3024 Swit_3056 Swit_3062 Swit_4269 Swit_4188 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_1552 Swit_2239 Swit_2251 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_0898 Swit_4920 Swit_2055 |
Nitrile hydratase(NFUNC_0002) |
必須 | A | NHAA (NRULE_0001) | Nitrile hydratase subunit alpha | |
NHAB (NRULE_0002) | Nitrile hydratase subunit beta | |
任意 | | P14K (NRULE_0006) | Nitrile hydratase activator P14K | |
| COBW (NRULE_0007) | CobW/P47K family protein | Swit_3760 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | |
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | Swit_3123 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | Swit_2699 Swit_4927 |
PANC (NRULE_0118) | Pantothenate synthetase | Swit_2788 |
Phenol degradation(NFUNC_0028) |
必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
B | PHEA1 (NRULE_0083) | Aromatic ring hydroxylase | |
C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | Swit_2298 Swit_3045 |
任意 | | FDR2 (NRULE_0057) | Ferredoxin reductase | Swit_0898 Swit_4920 Swit_2055 |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_0757 Swit_3096 Swit_1434 |
| MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_2253 Swit_4897 Swit_3266 Swit_3264 Swit_3062 Swit_3056 Swit_3024 Swit_2634 Swit_2521 Swit_2502 Swit_2310 Swit_2285 Swit_2271 Swit_2261 Swit_1708 Swit_1758 Swit_1829 Swit_1874 Swit_1987 Swit_1988 Swit_2034 Swit_2053 Swit_2239 Swit_2251 Swit_2260 Swit_4297 Swit_4280 Swit_4278 Swit_4273 Swit_4269 Swit_4188 Swit_0324 Swit_0336 Swit_0504 Swit_0538 Swit_4174 Swit_4150 Swit_3416 Swit_0672 Swit_0744 Swit_0837 Swit_0890 Swit_0893 Swit_0896 Swit_0932 Swit_0962 Swit_0966 Swit_0969 Swit_0973 Swit_1067 Swit_1396 Swit_1531 Swit_1541 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_1552 Swit_1559 Swit_1686 Swit_1687 Swit_4621 Swit_4861 Swit_3413 Swit_3410 Swit_3409 Swit_3396 Swit_3307 |
| FADR1 (NRULE_0101) | NADH-dependent flavin reductase | Swit_4267 Swit_4109 Swit_1899 |
Phytic acid hydrolysis(NFUNC_0085) |
必須 | A | PHYT (NRULE_0258) | 3-phytase | Swit_0531 |
B | APPA (NRULE_0259) | Periplasmic AppA protein | |
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014) |
必須 | A | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | Swit_1072 |
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | Swit_1073 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | |
PCAC (NRULE_0069) | 4-carboxymuconolactone decarboxylase | |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | Swit_0978 Swit_1070 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_4887 Swit_0752 Swit_4336 Swit_5019 |
B | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | Swit_1072 |
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | Swit_1073 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | Swit_4338 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | Swit_4337 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | Swit_5019 Swit_0752 Swit_4336 Swit_4887 |
Riboflavin biosynthesis(NFUNC_0058) |
必須 | A | RIBB (NRULE_0200) | 3,4-dihydroxy-2-butanone 4-phosphate synthase | Swit_1004 Swit_3771 Swit_2445 |
RIBA (NRULE_0201) | GTP cyclohydrolase-2 | Swit_1004 Swit_2445 Swit_3771 Swit_3789 |
RIBD (NRULE_0202) | Riboflavin biosynthesis protein RibD | |
RIBH (NRULE_0203) | 6,7-dimethyl-8-ribityllumazine synthase | Swit_2446 |
RIBE (NRULE_0204) | Riboflavin synthase | Swit_2444 |
任意 | | RIBF (NRULE_0205) | Riboflavin biosynthesis protein RibF | Swit_3785 |
Streptomycin resistance(NFUNC_0054) |
必須 | A | ANT6 (NRULE_0151) | Aminoglycoside 6-adenylyltransferase | |
B | ANT3 (NRULE_0154) | Streptomycin 3''-adenylyltransferase | |
C | APH6 (NRULE_0155) | Streptomycin 6-kinase | Swit_2677 |
任意 | | APH3 (NRULE_0156) | Aminoglycoside 3'-phosphotransferase | |
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007) |
必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | Swit_3096 Swit_0757 Swit_1434 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
PCHF (NRULE_0035) | 4-cresol dehydrogenase flavoprotein subunit | |
PCHC (NRULE_0036) | 4-cresol dehydrogenase cytochrome c subunit | |
PCHA (NRULE_0037) | p-hydroxybenzaldehyde dehydrogenase | |
POBA (NRULE_0038) | p-hydroxybenzoate hydroxylase | |
任意 | | MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | Swit_0966 Swit_0969 Swit_0973 Swit_1067 Swit_1396 Swit_1541 Swit_1542 Swit_1543 Swit_1549 Swit_1550 Swit_1552 Swit_1559 Swit_1686 Swit_1687 Swit_1708 Swit_1758 Swit_1531 Swit_0324 Swit_0336 Swit_0504 Swit_0538 Swit_0672 Swit_0744 Swit_0837 Swit_0890 Swit_0893 Swit_0896 Swit_0932 Swit_0962 Swit_3416 Swit_3413 Swit_3410 Swit_3409 Swit_3396 Swit_3307 Swit_3266 Swit_3264 Swit_3062 Swit_3056 Swit_3024 Swit_2634 Swit_2521 Swit_2502 Swit_2310 Swit_2285 Swit_2271 Swit_2261 Swit_2260 Swit_2253 Swit_2251 Swit_2239 Swit_2053 Swit_2034 Swit_1988 Swit_1987 Swit_1874 Swit_1829 Swit_4897 Swit_4861 Swit_4621 Swit_4297 Swit_4280 Swit_4278 Swit_4273 Swit_4269 Swit_4188 Swit_4174 Swit_4150 |
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031) |
必須 | A | TPS (NRULE_0119) | Trehalose-phosphate synthase | |
TPP (NRULE_0120) | Trehalose-6-phosphate phosphatase | Swit_3608 |
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060) |
必須 | A | EPD (NRULE_0208) | D-erythrose-4-phosphate dehydrogenase | |
PDXB (NRULE_0209) | Erythronate-4-phosphate dehydrogenase | |
SERC (NRULE_0210) | Phosphoserine aminotransferase | |
PDXA (NRULE_0211) | 4-hydroxythreonine-4-phosphate dehydrogenase | Swit_0409 |
PDXJ (NRULE_0212) | Pyridoxine 5'-phosphate synthase | Swit_3873 |