Alanine racemization(NFUNC_0063) |
| 必須 | A | ALR (NRULE_0228) | Alanine racemase | RTCIAT899_PC06965 RTCIAT899_CH06025 |
|---|
n-alkane hydroxylation(NFUNC_0008) |
| 必須 | A | CYP153 (NRULE_0041) | Cytochrome P450 CYP153 | |
|---|
| B | ALKB (NRULE_0024) | Alkane 1-monooxygenase | |
| C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC09270 RTCIAT899_CH04355 RTCIAT899_PC00090 RTCIAT899_PC02410 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
| 任意 | | RUBA (NRULE_0039) | Rubredoxin | |
|---|
| | RUBB (NRULE_0040) | Rubredoxin reductase | |
| | MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| | MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| | MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC01360 RTCIAT899_PC07060 RTCIAT899_CH04350 RTCIAT899_CH12765 RTCIAT899_PC05280 RTCIAT899_PC02580 |
D-allose biosynthesis(NFUNC_0077) |
| 必須 | A | LRHI (NRULE_0242) | L-rhamnose isomerase | RTCIAT899_PC02900 |
|---|
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043) |
| 必須 | A | APH6 (NRULE_0155) | Streptomycin 6-kinase | RTCIAT899_PC02855 |
|---|
| B | APH3 (NRULE_0156) | Aminoglycoside 3'-phosphotransferase | RTCIAT899_CH00745 |
| C | APH7 (NRULE_0157) | Hygromycin-B 7''-O-kinase | |
| D | HPH (NRULE_0174) | Hygromycin-B 4-O-kinase | |
Ampicillin resistance(NFUNC_0046) |
| 必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RTCIAT899_CH05265 |
|---|
| 任意 | | BLAB (NRULE_0123) | Metallo-beta-lactamase | |
|---|
| | BLAD (NRULE_0125) | Beta-lactamase class D | |
Aniline degradation (conversion into catechol)(NFUNC_0075) |
| 必須 | A | ATDA1 (NRULE_0240) | Gamma-glutamylanilide synthetase | |
|---|
ATDA3 (NRULE_0357) | Aniline dioxygenase large subunit | |
ATDA4 (NRULE_0358) | Aniline dioxygenase small subunit | |
| 任意 | | ATDA2 (NRULE_0241) | Putative gamma-glutamylanilide hydrolase | |
|---|
| | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC00090 RTCIAT899_PC02410 RTCIAT899_PC09270 RTCIAT899_CH04355 |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_CH12765 RTCIAT899_PC07060 RTCIAT899_PC05280 RTCIAT899_PC02580 RTCIAT899_CH04350 RTCIAT899_PC01360 |
| | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_PC07065 RTCIAT899_CH05730 |
Anthranilate biosynthesis(NFUNC_0038) |
| 必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | RTCIAT899_CH12950 |
|---|
TRPE (NRULE_0143) | Anthranilate synthase component I | RTCIAT899_CH12950 |
Anthranilate degradation (via hydroxylation)(NFUNC_0018) |
| 必須 | A | ANTA (NRULE_0044) | Anthranilate 1,2-dioxygenase large subunit | |
|---|
ANTB (NRULE_0045) | Anthranilate 1,2-dioxygenase small subunit | |
| 任意 | | ANTC (NRULE_0081) | Anthranilate 1,2-dioxygenase electron transfer component | |
|---|
| | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC09270 RTCIAT899_CH04355 RTCIAT899_PC00090 RTCIAT899_PC02410 |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC05280 RTCIAT899_CH04350 RTCIAT899_PC01360 RTCIAT899_PC02580 RTCIAT899_PC07060 RTCIAT899_CH12765 |
| | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_CH05730 RTCIAT899_PC07065 |
Arginine degradation(NFUNC_0074) |
| 必須 | A | ARGI (NRULE_0239) | Arginase | RTCIAT899_CH16615 |
|---|
Aromatic azo compounds degradation(NFUNC_0073) |
| 必須 | A | AZOR (NRULE_0236) | FMN-dependent NADH-azoreductase | RTCIAT899_CH07715 |
|---|
| B | AZR (NRULE_0237) | NADPH azoreductase | |
| C | AZOB (NRULE_0238) | NAD(P)H azoreductase | |
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016) |
| 必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | RTCIAT899_CH04350 |
|---|
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
| 任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC02410 RTCIAT899_PC09270 RTCIAT899_CH04355 RTCIAT899_PC00090 |
|---|
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC05280 RTCIAT899_PC02580 RTCIAT899_PC01360 RTCIAT899_CH12765 RTCIAT899_CH04350 RTCIAT899_PC07060 |
| | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_PC07065 RTCIAT899_CH05730 |
Arsenical resistance(NFUNC_0004) |
| 必須 | A | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
|---|
ARSC1 (NRULE_0017) | Arsenate reductase | RTCIAT899_CH02585 |
| B | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC2 (NRULE_0018) | Arsenate reductase | |
| C | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC3 (NRULE_0019) | Arsenate reductase | |
| D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC1 (NRULE_0017) | Arsenate reductase | RTCIAT899_CH02585 |
| E | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC2 (NRULE_0018) | Arsenate reductase | |
| F | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | |
ARSC3 (NRULE_0019) | Arsenate reductase | |
| 任意 | | ARSA (NRULE_0014) | Arsenical pump-driving ATPase | |
|---|
| | ARSD (NRULE_0020) | Arsenical resistance operon trans-acting repressor ArsD | |
| | ARSH (NRULE_0021) | ArsH protein | |
Artificial lacto-N-biose biosynthesis(NFUNC_0026) |
| 必須 | A | SP (NRULE_0109) | Sucrose phosphorylase | |
|---|
GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | |
GALE (NRULE_0111) | UDP-glucose 4-epimerase | RTCIAT899_CH03090 RTCIAT899_CH18200 RTCIAT899_PC09020 |
LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
Bacitracin resistance(NFUNC_0022) |
| 必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | RTCIAT899_PC04860 RTCIAT899_CH01930 |
|---|
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017) |
| 必須 | A | BENA (NRULE_0046) | Benzoate 1,2-dioxygenase alpha subunit | |
|---|
BENB (NRULE_0047) | Benzoate 1,2-dioxygenase beta subunit | |
BEND (NRULE_0082) | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | |
| 任意 | | BENC (NRULE_0055) | Benzoate 1,2-dioxygenase electron transfer component | |
|---|
| | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_CH04355 RTCIAT899_PC09270 RTCIAT899_PC02410 RTCIAT899_PC00090 |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC02580 RTCIAT899_CH04350 RTCIAT899_CH12765 RTCIAT899_PC01360 RTCIAT899_PC05280 RTCIAT899_PC07060 |
| | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_PC07065 RTCIAT899_CH05730 |
Beta-lactam antibiotic resistance(NFUNC_0033) |
| 必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RTCIAT899_CH05265 |
|---|
| B | BLAB (NRULE_0123) | Metallo-beta-lactamase | |
| C | BLAC (NRULE_0124) | Beta-lactamase class C | RTCIAT899_PC04360 |
| D | BLAD (NRULE_0125) | Beta-lactamase class D | |
Betaine biosynthesis (from choline)(NFUNC_0049) |
| 必須 | A | BETA (NRULE_0175) | Choline dehydrogenase | RTCIAT899_CH04945 |
|---|
| B | GBSB (NRULE_0176) | Alcohol dehydrogenase | |
BETB (NRULE_0177) | Betaine aldehyde dehydrogenase | RTCIAT899_CH04950 |
| C | CHOX (NRULE_0178) | Choline oxidase | |
Bioplastic degradation(NFUNC_0015) |
| 必須 | A | PHAZ1 (NRULE_0023) | Intracellular poly(3-hydroxyalkanoate) depolymerase | RTCIAT899_CH00090 |
|---|
| B | PHAZ2 (NRULE_0080) | Poly(3-hydroxyalkanoate) depolymerase | RTCIAT899_CH06585 |
| C | PHAZ3 (NRULE_0088) | Poly(3-hydroxyalkanoate) depolymerase | |
| 任意 | | PHAY (NRULE_0022) | D-(-)-3-hydroxybutyrate oligomer hydrolase | |
|---|
Bioplastic synthesis(NFUNC_0001) |
| 必須 | A | PHAC1 (NRULE_0010) | Poly(3-hydroxyalkanoate) polymerase | RTCIAT899_CH08060 |
|---|
| B | PHAE (NRULE_0012) | Poly(3-hydroxyalkanoate) polymerase PhaE subunit | |
PHAC2 (NRULE_0373) | Poly(3-hydroxyalkanoate) polymerase PhaC subunit | |
| C | PHAR (NRULE_0013) | Poly(3-hydroxyalkanoate) polymerase PhaR subunit | |
PHAC2 (NRULE_0373) | Poly(3-hydroxyalkanoate) polymerase PhaC subunit | |
| 任意 | | PHAB (NRULE_0011) | Acetoacetyl-CoA reductase | RTCIAT899_CH18010 |
|---|
| | PHAP1 (NRULE_0374) | Phasin | RTCIAT899_PB00665 RTCIAT899_CH03625 RTCIAT899_CH08450 |
| | PHAP2 (NRULE_0375) | Phasin | |
| | PHAP3 (NRULE_0376) | Phasin | |
| | PHAF (NRULE_0377) | Phasin PhaF | |
| | PHAI (NRULE_0378) | Phasin PhaI | |
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013) |
| 必須 | A | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
|---|
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | RTCIAT899_PC07385 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
| B | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | RTCIAT899_PC07385 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | |
| C | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | |
| D | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
Cephalosporin resistance(NFUNC_0048) |
| 必須 | A | BLAC (NRULE_0124) | Beta-lactamase class C | RTCIAT899_PC04360 |
|---|
| 任意 | | BLAA (NRULE_0122) | Beta-lactamase class A | RTCIAT899_CH05265 |
|---|
| | BLAB (NRULE_0123) | Metallo-beta-lactamase | |
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104) |
| 必須 | A | PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
|---|
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | RTCIAT899_CH09645 RTCIAT899_PA00605 RTCIAT899_CH14045 RTCIAT899_CH17370 RTCIAT899_CH05085 RTCIAT899_PC05695 RTCIAT899_PA00610 RTCIAT899_CH03760 RTCIAT899_CH03780 |
CLCE (NRULE_0384) | Maleylacetate reductase | |
CLCB (NRULE_0387) | Chloromuconate cycloisomerase | |
| B | CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | RTCIAT899_PC05695 RTCIAT899_PA00610 RTCIAT899_PA00605 RTCIAT899_CH17370 RTCIAT899_CH14045 RTCIAT899_CH09645 RTCIAT899_CH05085 RTCIAT899_CH03780 RTCIAT899_CH03760 |
CLCE (NRULE_0384) | Maleylacetate reductase | |
| 任意 | | CLCF (NRULE_0385) | Chloromuconolactone dehalogenase | |
|---|
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029) |
| 必須 | A | DSZA (NRULE_0103) | Dibenzothiophene-5,5-dioxide monooxygenase | |
|---|
DSZB (NRULE_0104) | 2'-hydroxybiphenyl-2-sulfinate desulfinase | |
DSZC (NRULE_0105) | Dibenzothiophene monooxygenase | |
| 任意 | | FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_CH14015 RTCIAT899_CH18405 RTCIAT899_PA00795 RTCIAT899_PC03910 RTCIAT899_PC07815 RTCIAT899_PC08155 RTCIAT899_CH09735 RTCIAT899_CH09335 |
|---|
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011) |
| 必須 | A | EDIO (NRULE_0058) | extradiol dioxygenase | RTCIAT899_PC02990 RTCIAT899_PC03855 |
|---|
METAH (NRULE_0059) | meta-cleavage compound hydrolase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | |
| B | EDIO (NRULE_0058) | extradiol dioxygenase | RTCIAT899_PC03855 RTCIAT899_PC02990 |
2HMSD (NRULE_0060) | 2-hydroxymuconic semialdehyde dehydrogenase | |
4OT (NRULE_0061) | 4-oxalocrotonate tautomerase | RTCIAT899_PC03405 |
4OD (NRULE_0062) | 4-oxalocrotonate decarboxylase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | |
Ectoine biosynthesis(NFUNC_0056) |
| 必須 | A | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | RTCIAT899_PB01645 |
|---|
ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | |
ECTC (NRULE_0188) | L-ectoine synthase | |
Folate biosynthesis(NFUNC_0044) |
| 必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | RTCIAT899_CH12950 |
|---|
DHPS (NRULE_0144) | Dihydropteroate synthase | RTCIAT899_CH10005 |
FOLM (NRULE_0146) | Dihydrofolate reductase FolM | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | RTCIAT899_CH10000 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | RTCIAT899_CH09995 |
FOLC (NRULE_0160) | Bifunctional protein FolC | RTCIAT899_CH00140 RTCIAT899_CH10395 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | RTCIAT899_CH15060 |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
| B | GLAT (NRULE_0142) | Glutamine amidotransferase | RTCIAT899_CH12950 |
DHPS (NRULE_0144) | Dihydropteroate synthase | RTCIAT899_CH10005 |
FOLA (NRULE_0147) | Dihydrofolate reductase | RTCIAT899_CH11060 |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | RTCIAT899_CH10000 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | RTCIAT899_CH09995 |
FOLC (NRULE_0160) | Bifunctional protein FolC | RTCIAT899_CH10395 RTCIAT899_CH00140 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | RTCIAT899_CH15060 |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
| C | GLAT (NRULE_0142) | Glutamine amidotransferase | RTCIAT899_CH12950 |
DHPS (NRULE_0144) | Dihydropteroate synthase | RTCIAT899_CH10005 |
DFR2 (NRULE_0148) | Dihydrofolate reductase type 2 | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | RTCIAT899_CH10000 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | RTCIAT899_CH09995 |
FOLC (NRULE_0160) | Bifunctional protein FolC | RTCIAT899_CH10395 RTCIAT899_CH00140 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | RTCIAT899_CH15060 |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010) |
| 必須 | A | DHAA (NRULE_0050) | Haloalkane dehalogenase | |
|---|
HAD (NRULE_0051) | (S)-2-haloacid dehalogenase | RTCIAT899_PC08355 |
| B | DHAA (NRULE_0050) | Haloalkane dehalogenase | |
DEH (NRULE_0075) | Haloacetate dehalogenase | |
Human milk oligosaccharides metabolism(NFUNC_0083) |
| 必須 | A | LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
|---|
| 任意 | | NAHK (NRULE_0256) | N-acetylhexosamine 1-kinase | |
|---|
| | GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | |
| | GALE (NRULE_0111) | UDP-glucose 4-epimerase | RTCIAT899_CH18200 RTCIAT899_CH03090 RTCIAT899_PC09020 |
Hydroxyectoine biosynthesis(NFUNC_0057) |
| 必須 | A | ECTD (NRULE_0189) | Ectoine hydroxylase | |
|---|
| 任意 | | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | RTCIAT899_PB01645 |
|---|
| | ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | |
| | ECTC (NRULE_0188) | L-ectoine synthase | |
4-hydroxyphenylacetate degradation(NFUNC_0068) |
| 必須 | A | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
|---|
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC03865 RTCIAT899_PC07920 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC03840 RTCIAT899_PC07965 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC03835 RTCIAT899_PC07970 |
| B | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | RTCIAT899_PC03855 |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC07920 RTCIAT899_PC03865 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC07965 RTCIAT899_PC03840 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC03835 RTCIAT899_PC07970 |
| C | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_CH09735 RTCIAT899_CH14015 RTCIAT899_CH18405 RTCIAT899_PA00795 RTCIAT899_PC07815 RTCIAT899_CH09335 RTCIAT899_PC03910 RTCIAT899_PC08155 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC07920 RTCIAT899_PC03865 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC03840 RTCIAT899_PC07965 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC07970 RTCIAT899_PC03835 |
| D | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_CH18405 RTCIAT899_PC08155 RTCIAT899_PC07815 RTCIAT899_PC03910 RTCIAT899_PA00795 RTCIAT899_CH14015 RTCIAT899_CH09735 RTCIAT899_CH09335 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | RTCIAT899_PC03855 |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC07920 RTCIAT899_PC03865 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC03840 RTCIAT899_PC07965 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC03835 RTCIAT899_PC07970 |
| E | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_PC08155 RTCIAT899_PC03910 RTCIAT899_PA00795 RTCIAT899_CH18405 RTCIAT899_CH14015 RTCIAT899_CH09735 RTCIAT899_CH09335 RTCIAT899_PC07815 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | RTCIAT899_PC03855 |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC07920 RTCIAT899_PC03865 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC07965 RTCIAT899_PC03840 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC03835 RTCIAT899_PC07970 |
| F | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_CH09735 RTCIAT899_PC08155 RTCIAT899_PC07815 RTCIAT899_PC03910 RTCIAT899_PA00795 RTCIAT899_CH18405 RTCIAT899_CH14015 RTCIAT899_CH09335 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC03865 RTCIAT899_PC07920 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC03840 RTCIAT899_PC07965 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC07970 RTCIAT899_PC03835 |
| G | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | RTCIAT899_PC03855 |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC07920 RTCIAT899_PC03865 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC03840 RTCIAT899_PC07965 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC03835 RTCIAT899_PC07970 |
| H | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | RTCIAT899_PC03860 |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | RTCIAT899_PC03865 RTCIAT899_PC07920 |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | RTCIAT899_PC07965 RTCIAT899_PC03840 |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | RTCIAT899_PC07970 RTCIAT899_PC03835 |
Kanamycin resistance(NFUNC_0052) |
| 必須 | A | ANT4 (NRULE_0152) | Kanamycin nucleotidyltransferase | |
|---|
| B | ANT2 (NRULE_0153) | 2''-aminoglycoside nucleotidyltransferase | |
| C | APH3 (NRULE_0156) | Aminoglycoside 3'-phosphotransferase | RTCIAT899_CH00745 |
| 任意 | | AAC3 (NRULE_0149) | Aminoglycoside N(3')-acetyltransferase | |
|---|
| | AAC6 (NRULE_0150) | Aminoglycoside N(6')-acetyltransferase | |
Metal-binding protein(NFUNC_0105) |
| 必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | RTCIAT899_CH00360 RTCIAT899_PC09115 RTCIAT899_PC04770 RTCIAT899_PC07890 RTCIAT899_CH03495 RTCIAT899_CH11630 RTCIAT899_CH15760 RTCIAT899_CH17670 RTCIAT899_CH17815 RTCIAT899_CH18475 RTCIAT899_PC03550 |
|---|
| B | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
| C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | RTCIAT899_CH10855 RTCIAT899_CH03475 RTCIAT899_CH00950 RTCIAT899_PC04070 RTCIAT899_CH18465 |
| D | MNTR (NRULE_0327) | DtxR family transcriptional regulator MntR | |
| E | CUER (NRULE_0328) | Copper-responsive transcriptional regulator CueR | RTCIAT899_PC09590 |
| F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | RTCIAT899_CH16685 |
| G | ZNTR (NRULE_0330) | Zinc-responsive transcriptional regulator ZntR | |
| H | NIKR (NRULE_0331) | Nickel-responsive transcriptional regulator NikR | RTCIAT899_PC07025 |
| I | ISCR (NRULE_0332) | Rrf2 family transcriptional regulator IscR | |
| J | SMTA (NRULE_0009) | Metallothionein | |
Molybdate transport (ABC transporter)(NFUNC_0097) |
| 必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | RTCIAT899_CH03475 RTCIAT899_CH10855 RTCIAT899_CH00950 RTCIAT899_CH18465 RTCIAT899_PC04070 |
|---|
| 任意 | | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
|---|
| | MODB (NRULE_0325) | Molybdate ABC transporter permease protein | RTCIAT899_CH18470 |
| | MODC (NRULE_0326) | Molybdate ABC transporter ATP-binding protein | RTCIAT899_CH00960 RTCIAT899_CH18475 |
Mycosamine biosynthesis(NFUNC_0095) |
| 必須 | A | AMPHDII (NRULE_0342) | GDP-3-keto-6-deoxy-D-mannose C-3 aminotransferase | |
|---|
GMD (NRULE_0343) | GDP-mannose 4,6-dehydratase | RTCIAT899_CH18290 |
| 任意 | | AMPHDI (NRULE_0341) | GDP-mycosamine glycosyltransferase | |
|---|
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067) |
| 必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | RTCIAT899_CH04350 |
|---|
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | RTCIAT899_PC02990 RTCIAT899_PC03855 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAHG (NRULE_0190) | Salicylate hydroxylase | |
| B | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | RTCIAT899_CH04350 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | RTCIAT899_PC02990 RTCIAT899_PC03855 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAGG (NRULE_0191) | Salicylate 5-hydroxylase alpha subunit | |
NAGH (NRULE_0192) | Salicylate 5-hydroxylase beta subunit | |
| 任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC00090 RTCIAT899_PC02410 RTCIAT899_PC09270 RTCIAT899_CH04355 |
|---|
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC05280 RTCIAT899_PC07060 RTCIAT899_PC02580 RTCIAT899_PC01360 RTCIAT899_CH12765 RTCIAT899_CH04350 |
| | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_CH05730 RTCIAT899_PC07065 |
Nitrile hydratase(NFUNC_0002) |
| 必須 | A | NHAA (NRULE_0001) | Nitrile hydratase subunit alpha | RTCIAT899_CH10995 |
|---|
NHAB (NRULE_0002) | Nitrile hydratase subunit beta | RTCIAT899_CH10990 |
| 任意 | | P14K (NRULE_0006) | Nitrile hydratase activator P14K | RTCIAT899_CH10985 |
|---|
| | COBW (NRULE_0007) | CobW/P47K family protein | RTCIAT899_CH15430 RTCIAT899_CH10510 RTCIAT899_CH10620 RTCIAT899_CH16545 RTCIAT899_PC08775 |
Nitrogenase(NFUNC_0094) |
| 必須 | A | NIFD (NRULE_0347) | Nitrogenase molybdenum-iron protein alpha chain | RTCIAT899_PB01570 |
|---|
NIFK (NRULE_0348) | Nitrogenase molybdenum-iron protein beta chain | RTCIAT899_PB01575 |
VNFH (NRULE_0353) | Nitrogenase reductase | RTCIAT899_PB01565 |
| B | ANFD (NRULE_0344) | Nitrogenase iron-iron protein alpha chain | |
ANFK (NRULE_0345) | Nitrogenase iron-iron protein beta chain | |
ANFG (NRULE_0346) | Nitrogenase iron-iron protein delta chain | |
VNFH (NRULE_0353) | Nitrogenase reductase | RTCIAT899_PB01565 |
| C | VNFD (NRULE_0349) | Nitrogenase vanadium-iron protein alpha chain | |
VNFK (NRULE_0351) | Nitrogenase vanadium-iron protein beta chain | |
VNFG (NRULE_0352) | Nitrogenase vanadium-iron protein delta chain | |
VNFH (NRULE_0353) | Nitrogenase reductase | RTCIAT899_PB01565 |
| D | VNFK (NRULE_0350) | Nitrogenase vanadium-iron protein alpha/delta chain | |
VNFK (NRULE_0351) | Nitrogenase vanadium-iron protein beta chain | |
VNFH (NRULE_0353) | Nitrogenase reductase | RTCIAT899_PB01565 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
| 必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | |
|---|
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | RTCIAT899_CH11215 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | RTCIAT899_PC09390 RTCIAT899_CH07615 |
PANC (NRULE_0118) | Pantothenate synthetase | RTCIAT899_CH11210 |
Penicillin resistance(NFUNC_0047) |
| 必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RTCIAT899_CH05265 |
|---|
| B | BLAD (NRULE_0125) | Beta-lactamase class D | |
| 任意 | | BLAB (NRULE_0123) | Metallo-beta-lactamase | |
|---|
Phenol degradation(NFUNC_0028) |
| 必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
|---|
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| B | PHEA1 (NRULE_0083) | Aromatic ring hydroxylase | RTCIAT899_PC03915 |
| C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | |
| 任意 | | FDR2 (NRULE_0057) | Ferredoxin reductase | RTCIAT899_PC07065 RTCIAT899_CH05730 |
|---|
| | FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC09270 RTCIAT899_CH04355 RTCIAT899_PC02410 RTCIAT899_PC00090 |
| | MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_CH04350 RTCIAT899_CH12765 RTCIAT899_PC05280 RTCIAT899_PC02580 RTCIAT899_PC07060 RTCIAT899_PC01360 |
| | FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RTCIAT899_PA00795 RTCIAT899_CH09335 RTCIAT899_CH09735 RTCIAT899_CH14015 RTCIAT899_CH18405 RTCIAT899_PC03910 RTCIAT899_PC07815 RTCIAT899_PC08155 |
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014) |
| 必須 | A | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | RTCIAT899_PC07370 |
|---|
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | RTCIAT899_PC07375 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | RTCIAT899_PC07365 |
PCAC (NRULE_0069) | 4-carboxymuconolactone decarboxylase | RTCIAT899_PC07380 |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | RTCIAT899_PC07385 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
| B | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | RTCIAT899_PC07370 |
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | RTCIAT899_PC07375 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | RTCIAT899_PC07365 |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | RTCIAT899_PC07420 |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | RTCIAT899_PC07425 |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | RTCIAT899_PC07430 |
Riboflavin biosynthesis(NFUNC_0058) |
| 必須 | A | RIBB (NRULE_0200) | 3,4-dihydroxy-2-butanone 4-phosphate synthase | RTCIAT899_PA00745 RTCIAT899_CH04470 RTCIAT899_PC06385 |
|---|
RIBA (NRULE_0201) | GTP cyclohydrolase-2 | RTCIAT899_CH04470 |
RIBD (NRULE_0202) | Riboflavin biosynthesis protein RibD | |
RIBH (NRULE_0203) | 6,7-dimethyl-8-ribityllumazine synthase | RTCIAT899_CH06495 RTCIAT899_CH11595 |
RIBE (NRULE_0204) | Riboflavin synthase | RTCIAT899_CH06475 |
| 任意 | | RIBF (NRULE_0205) | Riboflavin biosynthesis protein RibF | RTCIAT899_CH03975 |
|---|
Streptomycin resistance(NFUNC_0054) |
| 必須 | A | ANT6 (NRULE_0151) | Aminoglycoside 6-adenylyltransferase | |
|---|
| B | ANT3 (NRULE_0154) | Streptomycin 3''-adenylyltransferase | |
| C | APH6 (NRULE_0155) | Streptomycin 6-kinase | RTCIAT899_PC02855 |
| 任意 | | APH3 (NRULE_0156) | Aminoglycoside 3'-phosphotransferase | RTCIAT899_CH00745 |
|---|
Thiocyanate hydrolase(NFUNC_0003) |
| 必須 | A | SCNA (NRULE_0003) | Thiocyanate hydrolase subunit alpha | RTCIAT899_CH10985 RTCIAT899_CH10990 |
|---|
SCNB (NRULE_0004) | Thiocyanate hydrolase subunit beta | RTCIAT899_CH10990 RTCIAT899_CH10985 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
| B | SCNA (NRULE_0003) | Thiocyanate hydrolase subunit alpha | RTCIAT899_CH10990 RTCIAT899_CH10985 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
| C | SCNB (NRULE_0004) | Thiocyanate hydrolase subunit beta | RTCIAT899_CH10985 RTCIAT899_CH10990 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
Toluene degradation (conversion into benzoate)(NFUNC_0009) |
| 必須 | A | XYLA (NRULE_0025) | Xylene monooxygenase electron transfer component | |
|---|
XYLM (NRULE_0026) | Xylene monooxygenase | |
BADH (NRULE_0042) | Aryl-alcohol dehydrogenase | RTCIAT899_PA00690 RTCIAT899_PA00715 |
BZDH1 (NRULE_0043) | Benzaldehyde dehydrogenase | |
| B | XYLA (NRULE_0025) | Xylene monooxygenase electron transfer component | |
XYLM (NRULE_0026) | Xylene monooxygenase | |
BADH (NRULE_0042) | Aryl-alcohol dehydrogenase | RTCIAT899_PA00690 RTCIAT899_PA00715 |
BZDH2 (NRULE_0381) | NAD(P)-dependent benzaldehyde dehydrogenase | |
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007) |
| 必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
|---|
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | RTCIAT899_PC09270 RTCIAT899_PC00090 RTCIAT899_PC02410 RTCIAT899_CH04355 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
PCHF (NRULE_0035) | 4-cresol dehydrogenase flavoprotein subunit | |
PCHC (NRULE_0036) | 4-cresol dehydrogenase cytochrome c subunit | |
PCHA (NRULE_0037) | p-hydroxybenzaldehyde dehydrogenase | |
POBA (NRULE_0038) | p-hydroxybenzoate hydroxylase | RTCIAT899_PC07405 |
| 任意 | | MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
|---|
| | MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| | MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RTCIAT899_PC01360 RTCIAT899_PC02580 RTCIAT899_CH12765 RTCIAT899_PC05280 RTCIAT899_PC07060 RTCIAT899_CH04350 |
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037) |
| 必須 | A | TREY (NRULE_0140) | Maltooligosyl trehalose synthase | |
|---|
TREZ (NRULE_0141) | Malto-oligosyltrehalose trehalohydrolase | |
| 任意 | | GLGX (NRULE_0139) | Glycogen debranching enzyme | RTCIAT899_CH15315 |
|---|
Trehalose biosynthesis (from maltose)(NFUNC_0034) |
| 必須 | A | MAPA (NRULE_0126) | Maltose phosphorylase | |
|---|
TREP (NRULE_0127) | Alpha,alpha-trehalose phosphorylase | |
| B | TRES (NRULE_0128) | Trehalose synthase | RTCIAT899_CH12010 |
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031) |
| 必須 | A | TPS (NRULE_0119) | Trehalose-phosphate synthase | RTCIAT899_CH02085 |
|---|
TPP (NRULE_0120) | Trehalose-6-phosphate phosphatase | RTCIAT899_CH02090 |
Uptake of osmoprotectant(NFUNC_0061) |
| 必須 | A | OPUAC (NRULE_0213) | Osmoprotectant ABC transporter substrate-binding protein | |
|---|
OPUAB (NRULE_0214) | Osmoprotectant ABC transporter permease protein | |
OPUAA (NRULE_0215) | Osmoprotectant ABC transporter ATP-binding protein | RTCIAT899_CH10655 |
| B | EHUB (NRULE_0216) | Ectoine ABC transporter substrate-binding protein | RTCIAT899_PC08130 |
EHUC (NRULE_0217) | Ectoine ABC transporter permease protein | RTCIAT899_PC08125 |
EHUD (NRULE_0218) | Ectoine ABC transporter permease protein | RTCIAT899_PC08120 |
EHUA (NRULE_0219) | Ectoine ABC transporter ATP-binding protein | RTCIAT899_PC08115 |
| C | BCCT (NRULE_0220) | BCCT family transporter | |
| D | PROP (NRULE_0221) | Osmoprotectant transporter | |
| E | OPUE (NRULE_0222) | Sodium/proline symporter | |
| F | TEAA (NRULE_0223) | TRAP transporter substrate-binding protein TeaA | |
TEAB (NRULE_0224) | TRAP transporter small transmembrane protein TeaB | |
TEAC (NRULE_0225) | TRAP transporter large transmembrane protein TeaC | |
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060) |
| 必須 | A | EPD (NRULE_0208) | D-erythrose-4-phosphate dehydrogenase | |
|---|
PDXB (NRULE_0209) | Erythronate-4-phosphate dehydrogenase | |
SERC (NRULE_0210) | Phosphoserine aminotransferase | |
PDXA (NRULE_0211) | 4-hydroxythreonine-4-phosphate dehydrogenase | RTCIAT899_CH06160 RTCIAT899_CH15915 |
PDXJ (NRULE_0212) | Pyridoxine 5'-phosphate synthase | RTCIAT899_CH10960 |
