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推定保有機能 : Gordonia rubripertincta

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Acid resistance (by GABA antiporter)(NFUNC_0071)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGORBP_102_00130
GADC
(NRULE_0234)
Glutamate/gamma-aminobutyrate antiporter
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseGORBP_039_01440
n-alkane hydroxylation(NFUNC_0008)
必須A
CYP153
(NRULE_0041)
Cytochrome P450 CYP153GORBP_109_00410 GORBP_030_00030
B
ALKB
(NRULE_0024)
Alkane 1-monooxygenase
C
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGORBP_055_00090 GORBP_055_00110
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGORBP_055_00110 GORBP_055_00090
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_006_00670 GORBP_104_00690 GORBP_103_00080 GORBP_095_00090 GORBP_089_00070 GORBP_077_00060 GORBP_065_01250 GORBP_060_00750 GORBP_060_00060 GORBP_055_00320 GORBP_055_00100 GORBP_037_00360 GORBP_033_00070 GORBP_012_00240
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGORBP_055_00120
任意 
RUBA
(NRULE_0039)
Rubredoxin
 
RUBB
(NRULE_0040)
Rubredoxin reductase
 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_037_00210 GORBP_012_01640 GORBP_012_01330 GORBP_097_00280 GORBP_006_00120 GORBP_002_00150 GORBP_006_00510 GORBP_095_00110 GORBP_077_00670 GORBP_077_00070 GORBP_072_00620 GORBP_065_01120 GORBP_060_00770 GORBP_046_00470
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseGORBP_060_01340
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinase
D
HPH
(NRULE_0174)
Hygromycin-B 4-O-kinase
Aniline degradation (conversion into catechol)(NFUNC_0075)
必須A
ATDA1
(NRULE_0240)
Gamma-glutamylanilide synthetaseGORBP_002_00110
ATDA3
(NRULE_0357)
Aniline dioxygenase large subunitGORBP_002_00150
ATDA4
(NRULE_0358)
Aniline dioxygenase small subunitGORBP_002_00140
任意 
ATDA2
(NRULE_0241)
Putative gamma-glutamylanilide hydrolase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_089_00070 GORBP_006_00670 GORBP_065_01250 GORBP_060_00750 GORBP_060_00060 GORBP_055_00320 GORBP_055_00100 GORBP_037_00360 GORBP_033_00070 GORBP_012_00240 GORBP_077_00060 GORBP_095_00090 GORBP_103_00080 GORBP_104_00690
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_065_01120 GORBP_072_00620 GORBP_077_00670 GORBP_077_00070 GORBP_002_00150 GORBP_006_00120 GORBP_006_00510 GORBP_095_00110 GORBP_012_01330 GORBP_012_01640 GORBP_037_00210 GORBP_046_00470 GORBP_060_00770 GORBP_097_00280
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_030_00020 GORBP_049_00840 GORBP_012_01750
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGORBP_101_00350 GORBP_075_00560
TRPE
(NRULE_0143)
Anthranilate synthase component IGORBP_041_00430
Anthranilate degradation (via hydroxylation)(NFUNC_0018)
必須A
ANTA
(NRULE_0044)
Anthranilate 1,2-dioxygenase large subunit
ANTB
(NRULE_0045)
Anthranilate 1,2-dioxygenase small subunit
任意 
ANTC
(NRULE_0081)
Anthranilate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_104_00690 GORBP_089_00070 GORBP_095_00090 GORBP_103_00080 GORBP_077_00060 GORBP_006_00670 GORBP_012_00240 GORBP_033_00070 GORBP_037_00360 GORBP_055_00100 GORBP_055_00320 GORBP_060_00060 GORBP_060_00750 GORBP_065_01250
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_006_00120 GORBP_097_00280 GORBP_095_00110 GORBP_077_00670 GORBP_077_00070 GORBP_072_00620 GORBP_065_01120 GORBP_060_00770 GORBP_046_00470 GORBP_037_00210 GORBP_012_01640 GORBP_012_01330 GORBP_006_00510 GORBP_002_00150
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_030_00020 GORBP_049_00840 GORBP_012_01750
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGORBP_060_00770 GORBP_077_00670 GORBP_095_00110 GORBP_002_00150
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGORBP_077_00660 GORBP_060_00760 GORBP_002_00140 GORBP_095_00100
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_077_00060 GORBP_006_00670 GORBP_012_00240 GORBP_033_00070 GORBP_037_00360 GORBP_055_00100 GORBP_055_00320 GORBP_060_00060 GORBP_060_00750 GORBP_065_01250 GORBP_089_00070 GORBP_095_00090 GORBP_103_00080 GORBP_104_00690
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_012_01640 GORBP_097_00280 GORBP_095_00110 GORBP_077_00670 GORBP_077_00070 GORBP_072_00620 GORBP_065_01120 GORBP_060_00770 GORBP_046_00470 GORBP_037_00210 GORBP_002_00150 GORBP_006_00120 GORBP_006_00510 GORBP_012_01330
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_030_00020 GORBP_012_01750 GORBP_049_00840
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC1
(NRULE_0017)
Arsenate reductaseGORBP_108_00150
B
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC2
(NRULE_0018)
Arsenate reductase
C
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC3
(NRULE_0019)
Arsenate reductase
D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGORBP_035_00290 GORBP_104_00100 GORBP_001_00220
ARSC1
(NRULE_0017)
Arsenate reductaseGORBP_108_00150
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGORBP_001_00220 GORBP_104_00100 GORBP_035_00290
ARSC2
(NRULE_0018)
Arsenate reductase
F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGORBP_104_00100 GORBP_001_00220 GORBP_035_00290
ARSC3
(NRULE_0019)
Arsenate reductase
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPase
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsDGORBP_035_00260
 
ARSH
(NRULE_0021)
ArsH protein
Artificial lacto-N-biose biosynthesis(NFUNC_0026)
必須A
SP
(NRULE_0109)
Sucrose phosphorylase
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGORBP_064_00280
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseGORBP_094_00640
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunitGORBP_060_00770 GORBP_095_00110
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunitGORBP_060_00760 GORBP_095_00100
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseGORBP_060_00750 GORBP_095_00090
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer componentGORBP_060_00750 GORBP_095_00090
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_065_01250 GORBP_060_00750 GORBP_006_00670 GORBP_033_00070 GORBP_012_00240 GORBP_060_00060 GORBP_104_00690 GORBP_103_00080 GORBP_095_00090 GORBP_089_00070 GORBP_037_00360 GORBP_055_00100 GORBP_055_00320 GORBP_077_00060
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_065_01120 GORBP_006_00120 GORBP_006_00510 GORBP_012_01330 GORBP_012_01640 GORBP_002_00150 GORBP_037_00210 GORBP_046_00470 GORBP_060_00770 GORBP_097_00280 GORBP_095_00110 GORBP_077_00670 GORBP_077_00070 GORBP_072_00620
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_049_00840 GORBP_012_01750 GORBP_030_00020
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenase
B
GBSB
(NRULE_0176)
Alcohol dehydrogenase
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenase
C
CHOX
(NRULE_0178)
Choline oxidaseGORBP_012_02140
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthase
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseGORBP_068_00550
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDGORBP_068_00570
BIOB
(NRULE_0185)
Biotin synthaseGORBP_068_00580
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGORBP_060_00800 GORBP_108_00140
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGORBP_060_00810
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGORBP_060_00710
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_108_00300 GORBP_060_00230 GORBP_060_00700
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGORBP_060_00800 GORBP_108_00140
CATC
(NRULE_0054)
Muconolactone isomeraseGORBP_060_00810
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGORBP_060_00710
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_060_00700 GORBP_108_00300 GORBP_060_00230
CATB1
(NRULE_0386)
Muconate cycloisomerase
C
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGORBP_060_00800 GORBP_108_00140
CATC
(NRULE_0054)
Muconolactone isomeraseGORBP_060_00810
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_060_00230 GORBP_060_00700 GORBP_108_00300
CATB1
(NRULE_0386)
Muconate cycloisomerase
D
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGORBP_108_00140 GORBP_060_00800
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGORBP_060_00810
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_108_00300 GORBP_060_00230 GORBP_060_00700
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104)
必須A
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_108_00300 GORBP_060_00230 GORBP_060_00700
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGORBP_122_00340 GORBP_065_00320 GORBP_043_00260 GORBP_001_00430 GORBP_046_00270
CLCE
(NRULE_0384)
Maleylacetate reductase
CLCB
(NRULE_0387)
Chloromuconate cycloisomerase
B
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_060_00700 GORBP_060_00230 GORBP_108_00300
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGORBP_065_00320 GORBP_122_00340 GORBP_046_00270 GORBP_043_00260 GORBP_001_00430
CLCE
(NRULE_0384)
Maleylacetate reductase
任意 
CLCF
(NRULE_0385)
Chloromuconolactone dehalogenase
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029)
必須A
DSZA
(NRULE_0103)
Dibenzothiophene-5,5-dioxide monooxygenase
DSZB
(NRULE_0104)
2'-hydroxybiphenyl-2-sulfinate desulfinase
DSZC
(NRULE_0105)
Dibenzothiophene monooxygenase
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_108_00120 GORBP_006_00430 GORBP_012_01300 GORBP_028_00460 GORBP_039_01290 GORBP_049_00360 GORBP_060_00200 GORBP_065_01220 GORBP_065_00500 GORBP_077_00610
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011)
必須A
EDIO
(NRULE_0058)
extradiol dioxygenaseGORBP_065_00570 GORBP_039_00010 GORBP_012_01310 GORBP_077_01140 GORBP_006_00470 GORBP_065_01170
METAH
(NRULE_0059)
meta-cleavage compound hydrolase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGORBP_065_01330 GORBP_032_00100 GORBP_012_01420
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGORBP_032_00110 GORBP_065_01320 GORBP_012_01430
B
EDIO
(NRULE_0058)
extradiol dioxygenaseGORBP_077_01140 GORBP_012_01310 GORBP_006_00470 GORBP_065_00570 GORBP_065_01170 GORBP_039_00010
2HMSD
(NRULE_0060)
2-hydroxymuconic semialdehyde dehydrogenase
4OT
(NRULE_0061)
4-oxalocrotonate tautomerase
4OD
(NRULE_0062)
4-oxalocrotonate decarboxylase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGORBP_032_00100 GORBP_065_01330 GORBP_012_01420
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGORBP_065_01320 GORBP_012_01430 GORBP_032_00110
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGORBP_068_01420
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGORBP_068_01430
ECTC
(NRULE_0188)
L-ectoine synthaseGORBP_068_01410
Folate biosynthesis(NFUNC_0044)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGORBP_101_00350 GORBP_075_00560
DHPS
(NRULE_0144)
Dihydropteroate synthaseGORBP_059_00520 GORBP_065_01680
FOLM
(NRULE_0146)
Dihydrofolate reductase FolM
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGORBP_059_00510
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGORBP_059_00500
FOLC
(NRULE_0160)
Bifunctional protein FolCGORBP_068_01310
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGORBP_075_00560
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
B
GLAT
(NRULE_0142)
Glutamine amidotransferaseGORBP_075_00560 GORBP_101_00350
DHPS
(NRULE_0144)
Dihydropteroate synthaseGORBP_059_00520 GORBP_065_01680
FOLA
(NRULE_0147)
Dihydrofolate reductaseGORBP_053_01570
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGORBP_059_00510
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGORBP_059_00500
FOLC
(NRULE_0160)
Bifunctional protein FolCGORBP_068_01310
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGORBP_075_00560
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
C
GLAT
(NRULE_0142)
Glutamine amidotransferaseGORBP_075_00560 GORBP_101_00350
DHPS
(NRULE_0144)
Dihydropteroate synthaseGORBP_059_00520 GORBP_065_01680
DFR2
(NRULE_0148)
Dihydrofolate reductase type 2
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGORBP_059_00510
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGORBP_059_00500
FOLC
(NRULE_0160)
Bifunctional protein FolCGORBP_068_01310
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGORBP_075_00560
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGORBP_102_00130
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010)
必須A
DHAA
(NRULE_0050)
Haloalkane dehalogenase
HAD
(NRULE_0051)
(S)-2-haloacid dehalogenaseGORBP_014_00350
B
DHAA
(NRULE_0050)
Haloalkane dehalogenase
DEH
(NRULE_0075)
Haloacetate dehalogenase
Human milk oligosaccharides metabolism(NFUNC_0083)
必須A
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
任意 
NAHK
(NRULE_0256)
N-acetylhexosamine 1-kinase
 
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
 
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGORBP_064_00280
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylase
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGORBP_068_01420
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGORBP_068_01430
 
ECTC
(NRULE_0188)
L-ectoine synthaseGORBP_068_01410
4-hydroxyphenylacetate degradation(NFUNC_0068)
必須A
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
B
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
C
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_039_01290 GORBP_108_00120 GORBP_077_00610 GORBP_065_00500 GORBP_065_01220 GORBP_060_00200 GORBP_012_01300 GORBP_028_00460 GORBP_049_00360 GORBP_006_00430
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
D
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_065_00500 GORBP_077_00610 GORBP_108_00120 GORBP_028_00460 GORBP_039_01290 GORBP_012_01300 GORBP_060_00200 GORBP_065_01220 GORBP_006_00430 GORBP_049_00360
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
E
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_065_01220 GORBP_006_00430 GORBP_012_01300 GORBP_028_00460 GORBP_039_01290 GORBP_049_00360 GORBP_060_00200 GORBP_065_00500 GORBP_108_00120 GORBP_077_00610
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
F
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_060_00200 GORBP_006_00430 GORBP_012_01300 GORBP_028_00460 GORBP_039_01290 GORBP_049_00360 GORBP_065_01220 GORBP_065_00500 GORBP_077_00610 GORBP_108_00120
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
G
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
H
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydrataseGORBP_077_00720
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseGORBP_035_00100
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinGORBP_074_00360 GORBP_044_00110 GORBP_044_00080
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGORBP_044_00090 GORBP_074_00390
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntR
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueR
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRGORBP_108_00660
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntR
H
NIKR
(NRULE_0331)
Nickel-responsive transcriptional regulator NikR
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscR
J
SMTA
(NRULE_0009)
Metallothionein
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGORBP_044_00090 GORBP_074_00390
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinGORBP_044_00100
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding protein
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGORBP_077_00670 GORBP_002_00150 GORBP_060_00770 GORBP_095_00110
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGORBP_060_00760 GORBP_002_00140 GORBP_095_00100 GORBP_077_00660
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGORBP_012_01310 GORBP_077_01140 GORBP_006_00470 GORBP_065_01170 GORBP_039_00010 GORBP_065_00570
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAHG
(NRULE_0190)
Salicylate hydroxylase
B
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGORBP_077_00670 GORBP_060_00770 GORBP_095_00110 GORBP_002_00150
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGORBP_060_00760 GORBP_002_00140 GORBP_077_00660 GORBP_095_00100
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGORBP_065_01170 GORBP_006_00470 GORBP_012_01310 GORBP_077_01140 GORBP_065_00570 GORBP_039_00010
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAGG
(NRULE_0191)
Salicylate 5-hydroxylase alpha subunit
NAGH
(NRULE_0192)
Salicylate 5-hydroxylase beta subunit
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_033_00070 GORBP_012_00240 GORBP_006_00670 GORBP_089_00070 GORBP_095_00090 GORBP_103_00080 GORBP_104_00690 GORBP_077_00060 GORBP_065_01250 GORBP_060_00750 GORBP_060_00060 GORBP_055_00320 GORBP_055_00100 GORBP_037_00360
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_046_00470 GORBP_037_00210 GORBP_012_01640 GORBP_077_00070 GORBP_077_00670 GORBP_095_00110 GORBP_097_00280 GORBP_065_01120 GORBP_072_00620 GORBP_060_00770 GORBP_012_01330 GORBP_006_00510 GORBP_006_00120 GORBP_002_00150
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_049_00840 GORBP_012_01750 GORBP_030_00020
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alpha
NHAB
(NRULE_0002)
Nitrile hydratase subunit beta
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14K
 
COBW
(NRULE_0007)
CobW/P47K family proteinGORBP_065_00650 GORBP_101_00230
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseGORBP_059_00430
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseGORBP_097_00550
PANE
(NRULE_0117)
2-dehydropantoate 2-reductase
PANC
(NRULE_0118)
Pantothenate synthetaseGORBP_059_00440
Phenol degradation(NFUNC_0028)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGORBP_055_00090 GORBP_055_00110
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGORBP_055_00110 GORBP_055_00090
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseGORBP_108_00130
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylase
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseGORBP_049_00840 GORBP_030_00020 GORBP_012_01750
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_006_00670 GORBP_012_00240 GORBP_033_00070 GORBP_037_00360 GORBP_055_00100 GORBP_055_00320 GORBP_060_00060 GORBP_060_00750 GORBP_065_01250 GORBP_077_00060 GORBP_103_00080 GORBP_104_00690 GORBP_089_00070 GORBP_095_00090
 
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGORBP_055_00120
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_065_01120 GORBP_060_00770 GORBP_046_00470 GORBP_037_00210 GORBP_012_01640 GORBP_012_01330 GORBP_006_00510 GORBP_006_00120 GORBP_002_00150 GORBP_072_00620 GORBP_077_00070 GORBP_077_00670 GORBP_095_00110 GORBP_097_00280
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGORBP_039_01290 GORBP_060_00200 GORBP_065_01220 GORBP_065_00500 GORBP_077_00610 GORBP_108_00120 GORBP_006_00430 GORBP_012_01300 GORBP_028_00460 GORBP_049_00360
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunit
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunit
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylase
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGORBP_060_00710
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_108_00300 GORBP_060_00230 GORBP_060_00700
B
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunit
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunit
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGORBP_060_00720
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGORBP_060_00230 GORBP_060_00700 GORBP_108_00300
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseGORBP_023_00020 GORBP_039_01280
RIBA
(NRULE_0201)
GTP cyclohydrolase-2GORBP_039_01280 GORBP_023_00020 GORBP_062_00060
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibD
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseGORBP_023_00030
RIBE
(NRULE_0204)
Riboflavin synthase
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFGORBP_068_02360
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferase
B
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferase
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseGORBP_060_01340
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
Thiocyanate hydrolase(NFUNC_0003)
必須A
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaGORBP_103_00450
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaGORBP_103_00450
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGORBP_103_00460
B
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaGORBP_103_00450
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGORBP_103_00460
C
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaGORBP_103_00450
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGORBP_103_00460
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGORBP_055_00090 GORBP_055_00110
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGORBP_055_00090 GORBP_055_00110
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGORBP_077_00060 GORBP_006_00670 GORBP_012_00240 GORBP_033_00070 GORBP_037_00360 GORBP_055_00100 GORBP_055_00320 GORBP_104_00690 GORBP_060_00060 GORBP_060_00750 GORBP_065_01250 GORBP_089_00070 GORBP_095_00090 GORBP_103_00080
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGORBP_055_00120
PCHF
(NRULE_0035)
4-cresol dehydrogenase flavoprotein subunit
PCHC
(NRULE_0036)
4-cresol dehydrogenase cytochrome c subunit
PCHA
(NRULE_0037)
p-hydroxybenzaldehyde dehydrogenase
POBA
(NRULE_0038)
p-hydroxybenzoate hydroxylase
任意 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGORBP_097_00280 GORBP_065_01120 GORBP_060_00770 GORBP_046_00470 GORBP_037_00210 GORBP_012_01640 GORBP_072_00620 GORBP_012_01330 GORBP_006_00510 GORBP_077_00070 GORBP_077_00670 GORBP_095_00110 GORBP_002_00150 GORBP_006_00120
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseGORBP_068_00510
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseGORBP_068_00400
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeGORBP_068_00520
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseGORBP_100_00140
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseGORBP_053_00570 GORBP_100_00150
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding protein
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease protein
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding protein
B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding protein
EHUC
(NRULE_0217)
Ectoine ABC transporter permease protein
EHUD
(NRULE_0218)
Ectoine ABC transporter permease protein
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding protein
C
BCCT
(NRULE_0220)
BCCT family transporterGORBP_108_00610 GORBP_012_02120
D
PROP
(NRULE_0221)
Osmoprotectant transporter
E
OPUE
(NRULE_0222)
Sodium/proline symporter
F
TEAA
(NRULE_0223)
TRAP transporter substrate-binding protein TeaA
TEAB
(NRULE_0224)
TRAP transporter small transmembrane protein TeaB
TEAC
(NRULE_0225)
TRAP transporter large transmembrane protein TeaC
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenase
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenase
SERC
(NRULE_0210)
Phosphoserine aminotransferaseGORBP_049_00600
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenase
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthase
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSGORBP_053_00490
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTGORBP_053_00440