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推定保有機能 : Gordonia sihwensis

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タイプパターン 構成遺伝子 該当CDS
Acid resistance (by GABA antiporter)(NFUNC_0071)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGSI01S_38_00170
GADC
(NRULE_0234)
Glutamate/gamma-aminobutyrate antiporter
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseGSI01S_21_00140
n-alkane hydroxylation(NFUNC_0008)
必須A
CYP153
(NRULE_0041)
Cytochrome P450 CYP153
B
ALKB
(NRULE_0024)
Alkane 1-monooxygenaseGSI01S_17_00170 GSI01S_08_01750
C
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGSI01S_09_00250 GSI01S_09_00270
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGSI01S_09_00270 GSI01S_09_00250
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_19_00310 GSI01S_08_01800 GSI01S_08_00630 GSI01S_09_00230 GSI01S_28_00270 GSI01S_29_00510
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGSI01S_09_00260
任意 
RUBA
(NRULE_0039)
RubredoxinGSI01S_17_00160 GSI01S_17_00150
 
RUBB
(NRULE_0040)
Rubredoxin reductase
 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunitGSI01S_09_00240
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_20_00920 GSI01S_20_00090 GSI01S_20_00210 GSI01S_20_01010 GSI01S_06_01270 GSI01S_07_00620 GSI01S_28_00260 GSI01S_25_00100
Aniline degradation (conversion into catechol)(NFUNC_0075)
必須A
ATDA1
(NRULE_0240)
Gamma-glutamylanilide synthetase
ATDA3
(NRULE_0357)
Aniline dioxygenase large subunit
ATDA4
(NRULE_0358)
Aniline dioxygenase small subunit
任意 
ATDA2
(NRULE_0241)
Putative gamma-glutamylanilide hydrolase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_29_00510 GSI01S_28_00270 GSI01S_19_00310 GSI01S_08_00630 GSI01S_09_00230 GSI01S_08_01800
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_06_01270 GSI01S_28_00260 GSI01S_25_00100 GSI01S_20_00090 GSI01S_20_00210 GSI01S_20_01010 GSI01S_20_00920 GSI01S_07_00620
 
FDR2
(NRULE_0057)
Ferredoxin reductase
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGSI01S_16_01340
TRPE
(NRULE_0143)
Anthranilate synthase component I
Anthranilate degradation (via hydroxylation)(NFUNC_0018)
必須A
ANTA
(NRULE_0044)
Anthranilate 1,2-dioxygenase large subunit
ANTB
(NRULE_0045)
Anthranilate 1,2-dioxygenase small subunit
任意 
ANTC
(NRULE_0081)
Anthranilate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_08_01800 GSI01S_08_00630 GSI01S_09_00230 GSI01S_19_00310 GSI01S_28_00270 GSI01S_29_00510
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_20_00920 GSI01S_07_00620 GSI01S_06_01270 GSI01S_28_00260 GSI01S_25_00100 GSI01S_20_00090 GSI01S_20_00210 GSI01S_20_01010
 
FDR2
(NRULE_0057)
Ferredoxin reductase
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGSI01S_28_00260 GSI01S_20_00090 GSI01S_20_00210
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGSI01S_20_00200 GSI01S_20_00080
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_19_00310 GSI01S_28_00270 GSI01S_09_00230 GSI01S_29_00510 GSI01S_08_00630 GSI01S_08_01800
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_20_00210 GSI01S_20_00090 GSI01S_25_00100 GSI01S_28_00260 GSI01S_20_01010 GSI01S_20_00920 GSI01S_07_00620 GSI01S_06_01270
 
FDR2
(NRULE_0057)
Ferredoxin reductase
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC1
(NRULE_0017)
Arsenate reductaseGSI01S_32_00260 GSI01S_19_00680
B
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC2
(NRULE_0018)
Arsenate reductase
C
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC3
(NRULE_0019)
Arsenate reductase
D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGSI01S_05_00520
ARSC1
(NRULE_0017)
Arsenate reductaseGSI01S_32_00260 GSI01S_19_00680
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGSI01S_05_00520
ARSC2
(NRULE_0018)
Arsenate reductase
F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGSI01S_05_00520
ARSC3
(NRULE_0019)
Arsenate reductase
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPase
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsD
 
ARSH
(NRULE_0021)
ArsH protein
Artificial lacto-N-biose biosynthesis(NFUNC_0026)
必須A
SP
(NRULE_0109)
Sucrose phosphorylase
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferaseGSI01S_37_00070
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGSI01S_38_00070
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseGSI01S_03_01170
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunitGSI01S_28_00260
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunit
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseGSI01S_28_00270
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer componentGSI01S_28_00270
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_09_00230 GSI01S_29_00510 GSI01S_28_00270 GSI01S_19_00310 GSI01S_08_00630 GSI01S_08_01800
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_20_00210 GSI01S_20_00090 GSI01S_28_00260 GSI01S_25_00100 GSI01S_06_01270 GSI01S_07_00620 GSI01S_20_00920 GSI01S_20_01010
 
FDR2
(NRULE_0057)
Ferredoxin reductase
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthase
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseGSI01S_06_02040
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDGSI01S_06_02060
BIOB
(NRULE_0185)
Biotin synthaseGSI01S_06_02070
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGSI01S_28_00230
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGSI01S_28_00220
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGSI01S_28_00290
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_15_00280 GSI01S_28_00300
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGSI01S_28_00230
CATC
(NRULE_0054)
Muconolactone isomeraseGSI01S_28_00220
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGSI01S_28_00290
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_28_00300 GSI01S_15_00280
CATB1
(NRULE_0386)
Muconate cycloisomerase
C
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGSI01S_28_00230
CATC
(NRULE_0054)
Muconolactone isomeraseGSI01S_28_00220
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_28_00300 GSI01S_15_00280
CATB1
(NRULE_0386)
Muconate cycloisomerase
D
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGSI01S_28_00230
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGSI01S_28_00220
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_28_00300 GSI01S_15_00280
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104)
必須A
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_28_00300 GSI01S_15_00280
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGSI01S_11_00710 GSI01S_14_00780 GSI01S_29_00400
CLCE
(NRULE_0384)
Maleylacetate reductaseGSI01S_13_01080
CLCB
(NRULE_0387)
Chloromuconate cycloisomerase
B
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_15_00280 GSI01S_28_00300
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGSI01S_29_00400 GSI01S_14_00780 GSI01S_11_00710
CLCE
(NRULE_0384)
Maleylacetate reductaseGSI01S_13_01080
任意 
CLCF
(NRULE_0385)
Chloromuconolactone dehalogenase
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029)
必須A
DSZA
(NRULE_0103)
Dibenzothiophene-5,5-dioxide monooxygenase
DSZB
(NRULE_0104)
2'-hydroxybiphenyl-2-sulfinate desulfinase
DSZC
(NRULE_0105)
Dibenzothiophene monooxygenase
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_01_02430 GSI01S_02_00130 GSI01S_25_00070 GSI01S_05_00270
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011)
必須A
EDIO
(NRULE_0058)
extradiol dioxygenaseGSI01S_20_00170 GSI01S_41_00030 GSI01S_25_00080
METAH
(NRULE_0059)
meta-cleavage compound hydrolase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGSI01S_07_00500
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGSI01S_07_00490
B
EDIO
(NRULE_0058)
extradiol dioxygenaseGSI01S_25_00080 GSI01S_20_00170 GSI01S_41_00030
2HMSD
(NRULE_0060)
2-hydroxymuconic semialdehyde dehydrogenaseGSI01S_07_00410
4OT
(NRULE_0061)
4-oxalocrotonate tautomeraseGSI01S_07_00120
4OD
(NRULE_0062)
4-oxalocrotonate decarboxylase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGSI01S_07_00500
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGSI01S_07_00490
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGSI01S_15_01220
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGSI01S_15_01230
ECTC
(NRULE_0188)
L-ectoine synthaseGSI01S_15_01210
Folate biosynthesis(NFUNC_0044)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGSI01S_16_01340
DHPS
(NRULE_0144)
Dihydropteroate synthaseGSI01S_10_00690 GSI01S_12_00110
FOLM
(NRULE_0146)
Dihydrofolate reductase FolM
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGSI01S_12_00120
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGSI01S_12_00130
FOLC
(NRULE_0160)
Bifunctional protein FolCGSI01S_15_01120
PABB
(NRULE_0161)
Para-aminobenzoate synthase component I
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
B
GLAT
(NRULE_0142)
Glutamine amidotransferaseGSI01S_16_01340
DHPS
(NRULE_0144)
Dihydropteroate synthaseGSI01S_12_00110 GSI01S_10_00690
FOLA
(NRULE_0147)
Dihydrofolate reductaseGSI01S_13_00220
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGSI01S_12_00120
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGSI01S_12_00130
FOLC
(NRULE_0160)
Bifunctional protein FolCGSI01S_15_01120
PABB
(NRULE_0161)
Para-aminobenzoate synthase component I
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
C
GLAT
(NRULE_0142)
Glutamine amidotransferaseGSI01S_16_01340
DHPS
(NRULE_0144)
Dihydropteroate synthaseGSI01S_10_00690 GSI01S_12_00110
DFR2
(NRULE_0148)
Dihydrofolate reductase type 2
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGSI01S_12_00120
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGSI01S_12_00130
FOLC
(NRULE_0160)
Bifunctional protein FolCGSI01S_15_01120
PABB
(NRULE_0161)
Para-aminobenzoate synthase component I
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGSI01S_38_00170
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010)
必須A
DHAA
(NRULE_0050)
Haloalkane dehalogenase
HAD
(NRULE_0051)
(S)-2-haloacid dehalogenaseGSI01S_14_00340
B
DHAA
(NRULE_0050)
Haloalkane dehalogenase
DEH
(NRULE_0075)
Haloacetate dehalogenase
Human milk oligosaccharides metabolism(NFUNC_0083)
必須A
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
任意 
NAHK
(NRULE_0256)
N-acetylhexosamine 1-kinase
 
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferaseGSI01S_37_00070
 
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGSI01S_38_00070
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseGSI01S_20_00590
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGSI01S_15_01220
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGSI01S_15_01230
 
ECTC
(NRULE_0188)
L-ectoine synthaseGSI01S_15_01210
4-hydroxyphenylacetate degradation(NFUNC_0068)
必須A
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
B
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
C
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_25_00070 GSI01S_05_00270 GSI01S_02_00130 GSI01S_01_02430
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
D
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_02_00130 GSI01S_25_00070 GSI01S_05_00270 GSI01S_01_02430
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
E
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_01_02430 GSI01S_25_00070 GSI01S_05_00270 GSI01S_02_00130
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
F
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_25_00070 GSI01S_05_00270 GSI01S_02_00130 GSI01S_01_02430
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
G
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
H
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
Macrolide antibiotic resistance(NFUNC_0045)
必須A
ERM
(NRULE_0164)
rRNA adenine N-6-methyltransferase
B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseGSI01S_10_00730
C
MACA
(NRULE_0166)
Macrolide-specific efflux protein MacA
MACB
(NRULE_0167)
Macrolide export ATP-binding/permease protein MacB
D
ERE
(NRULE_0168)
Erythromycin esterase
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferase
F
MGT
(NRULE_0170)
Macrolide glycosyltransferase
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseGSI01S_42_00020
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinGSI01S_30_00310 GSI01S_08_01170
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGSI01S_08_01160 GSI01S_17_00250 GSI01S_30_00280
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntR
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueR
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRGSI01S_14_01440
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntR
H
NIKR
(NRULE_0331)
Nickel-responsive transcriptional regulator NikR
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscR
J
SMTA
(NRULE_0009)
Metallothionein
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGSI01S_30_00280 GSI01S_17_00250 GSI01S_08_01160
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinGSI01S_08_01150
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding protein
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGSI01S_20_00090 GSI01S_20_00210 GSI01S_28_00260
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGSI01S_20_00200 GSI01S_20_00080
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGSI01S_25_00080 GSI01S_20_00170 GSI01S_41_00030
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAHG
(NRULE_0190)
Salicylate hydroxylase
B
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGSI01S_20_00090 GSI01S_28_00260 GSI01S_20_00210
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGSI01S_20_00200 GSI01S_20_00080
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGSI01S_20_00170 GSI01S_41_00030 GSI01S_25_00080
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAGG
(NRULE_0191)
Salicylate 5-hydroxylase alpha subunit
NAGH
(NRULE_0192)
Salicylate 5-hydroxylase beta subunit
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_08_00630 GSI01S_29_00510 GSI01S_28_00270 GSI01S_19_00310 GSI01S_09_00230 GSI01S_08_01800
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_28_00260 GSI01S_06_01270 GSI01S_07_00620 GSI01S_20_00920 GSI01S_20_01010 GSI01S_20_00210 GSI01S_20_00090 GSI01S_25_00100
 
FDR2
(NRULE_0057)
Ferredoxin reductase
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alpha
NHAB
(NRULE_0002)
Nitrile hydratase subunit beta
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14K
 
COBW
(NRULE_0007)
CobW/P47K family proteinGSI01S_45_00050 GSI01S_01_00520
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseGSI01S_12_00180
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseGSI01S_06_00840
PANE
(NRULE_0117)
2-dehydropantoate 2-reductase
PANC
(NRULE_0118)
Pantothenate synthetaseGSI01S_12_00170
Phenol degradation(NFUNC_0028)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGSI01S_09_00250 GSI01S_09_00270
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGSI01S_09_00270 GSI01S_09_00250
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunitGSI01S_09_00240
B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylase
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseGSI01S_15_00850
任意 
FDR2
(NRULE_0057)
Ferredoxin reductase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_08_00630 GSI01S_29_00510 GSI01S_19_00310 GSI01S_09_00230 GSI01S_08_01800 GSI01S_28_00270
 
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGSI01S_09_00260
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_20_00090 GSI01S_28_00260 GSI01S_25_00100 GSI01S_20_00210 GSI01S_20_01010 GSI01S_20_00920 GSI01S_07_00620 GSI01S_06_01270
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGSI01S_25_00070 GSI01S_05_00270 GSI01S_02_00130 GSI01S_01_02430
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitGSI01S_51_00050
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitGSI01S_51_00060
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylaseGSI01S_51_00030
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGSI01S_28_00290
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_28_00300 GSI01S_15_00280
B
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitGSI01S_51_00050
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitGSI01S_51_00060
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGSI01S_09_00310
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGSI01S_15_00280 GSI01S_28_00300
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseGSI01S_03_00390
RIBA
(NRULE_0201)
GTP cyclohydrolase-2GSI01S_03_00390
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibD
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseGSI01S_03_00400
RIBE
(NRULE_0204)
Riboflavin synthaseGSI01S_03_00380
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFGSI01S_13_00110
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGSI01S_09_00270 GSI01S_09_00250
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGSI01S_09_00250 GSI01S_09_00270
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGSI01S_08_01800 GSI01S_29_00510 GSI01S_28_00270 GSI01S_19_00310 GSI01S_09_00230 GSI01S_08_00630
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGSI01S_09_00260
PCHF
(NRULE_0035)
4-cresol dehydrogenase flavoprotein subunit
PCHC
(NRULE_0036)
4-cresol dehydrogenase cytochrome c subunit
PCHA
(NRULE_0037)
p-hydroxybenzaldehyde dehydrogenase
POBA
(NRULE_0038)
p-hydroxybenzoate hydroxylase
任意 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunitGSI01S_09_00240
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGSI01S_28_00260 GSI01S_25_00100 GSI01S_20_00090 GSI01S_20_00210 GSI01S_20_01010 GSI01S_20_00920 GSI01S_07_00620 GSI01S_06_01270
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseGSI01S_06_02010
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolase
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzyme
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseGSI01S_25_00850
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseGSI01S_25_00860
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding protein
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease protein
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding protein
B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinGSI01S_03_00550
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinGSI01S_03_00540
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinGSI01S_03_00530
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinGSI01S_03_00520
C
BCCT
(NRULE_0220)
BCCT family transporterGSI01S_29_00770
D
PROP
(NRULE_0221)
Osmoprotectant transporter
E
OPUE
(NRULE_0222)
Sodium/proline symporterGSI01S_14_01160
F
TEAA
(NRULE_0223)
TRAP transporter substrate-binding protein TeaA
TEAB
(NRULE_0224)
TRAP transporter small transmembrane protein TeaB
TEAC
(NRULE_0225)
TRAP transporter large transmembrane protein TeaC
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenase
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenase
SERC
(NRULE_0210)
Phosphoserine aminotransferaseGSI01S_02_00280
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenase
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthase
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSGSI01S_13_01650
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTGSI01S_48_00110