Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | NitalDRAFT_0327 |
n-alkane hydroxylation(NFUNC_0008) |
必須 | A | CYP153 (NRULE_0041) | Cytochrome P450 CYP153 | |
B | ALKB (NRULE_0024) | Alkane 1-monooxygenase | |
C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
任意 | | RUBA (NRULE_0039) | Rubredoxin | |
| RUBB (NRULE_0040) | Rubredoxin reductase | |
| MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_4752 NitalDRAFT_4318 NitalDRAFT_3269 NitalDRAFT_2650 NitalDRAFT_4814 NitalDRAFT_1726 NitalDRAFT_0878 NitalDRAFT_0793 NitalDRAFT_0749 NitalDRAFT_0472 |
Aniline degradation (conversion into catechol)(NFUNC_0075) |
必須 | A | ATDA1 (NRULE_0240) | Gamma-glutamylanilide synthetase | |
ATDA3 (NRULE_0357) | Aniline dioxygenase large subunit | |
ATDA4 (NRULE_0358) | Aniline dioxygenase small subunit | |
任意 | | ATDA2 (NRULE_0241) | Putative gamma-glutamylanilide hydrolase | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_3269 NitalDRAFT_2650 NitalDRAFT_1726 NitalDRAFT_0793 NitalDRAFT_0878 NitalDRAFT_4814 NitalDRAFT_4752 NitalDRAFT_4318 NitalDRAFT_0472 NitalDRAFT_0749 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | NitalDRAFT_0863 |
TRPE (NRULE_0143) | Anthranilate synthase component I | NitalDRAFT_3795 |
Anthranilate degradation (via hydroxylation)(NFUNC_0018) |
必須 | A | ANTA (NRULE_0044) | Anthranilate 1,2-dioxygenase large subunit | |
ANTB (NRULE_0045) | Anthranilate 1,2-dioxygenase small subunit | |
任意 | | ANTC (NRULE_0081) | Anthranilate 1,2-dioxygenase electron transfer component | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_1726 NitalDRAFT_2650 NitalDRAFT_0878 NitalDRAFT_0472 NitalDRAFT_0749 NitalDRAFT_0793 NitalDRAFT_4318 NitalDRAFT_4752 NitalDRAFT_4814 NitalDRAFT_3269 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | |
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016) |
必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | NitalDRAFT_1726 NitalDRAFT_0749 NitalDRAFT_4752 NitalDRAFT_4814 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | NitalDRAFT_4753 NitalDRAFT_1727 NitalDRAFT_0748 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_3269 NitalDRAFT_0472 NitalDRAFT_0749 NitalDRAFT_0793 NitalDRAFT_0878 NitalDRAFT_1726 NitalDRAFT_2650 NitalDRAFT_4318 NitalDRAFT_4752 NitalDRAFT_4814 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | |
Arsenical resistance(NFUNC_0004) |
必須 | A | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC1 (NRULE_0017) | Arsenate reductase | NitalDRAFT_2769 |
B | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC2 (NRULE_0018) | Arsenate reductase | |
C | ARSB1 (NRULE_0015) | Arsenical pump membrane protein | |
ARSC3 (NRULE_0019) | Arsenate reductase | |
D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | NitalDRAFT_0547 |
ARSC1 (NRULE_0017) | Arsenate reductase | NitalDRAFT_2769 |
E | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | NitalDRAFT_0547 |
ARSC2 (NRULE_0018) | Arsenate reductase | |
F | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | NitalDRAFT_0547 |
ARSC3 (NRULE_0019) | Arsenate reductase | |
任意 | | ARSA (NRULE_0014) | Arsenical pump-driving ATPase | NitalDRAFT_2433 NitalDRAFT_3890 |
| ARSD (NRULE_0020) | Arsenical resistance operon trans-acting repressor ArsD | |
| ARSH (NRULE_0021) | ArsH protein | |
Artificial lacto-N-biose biosynthesis(NFUNC_0026) |
必須 | A | SP (NRULE_0109) | Sucrose phosphorylase | NitalDRAFT_2907 |
GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | NitalDRAFT_1642 |
GALE (NRULE_0111) | UDP-glucose 4-epimerase | NitalDRAFT_3528 NitalDRAFT_3075 NitalDRAFT_1647 |
LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | NitalDRAFT_1706 |
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017) |
必須 | A | BENA (NRULE_0046) | Benzoate 1,2-dioxygenase alpha subunit | |
BENB (NRULE_0047) | Benzoate 1,2-dioxygenase beta subunit | |
BEND (NRULE_0082) | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | |
任意 | | BENC (NRULE_0055) | Benzoate 1,2-dioxygenase electron transfer component | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_4752 NitalDRAFT_4814 NitalDRAFT_0472 NitalDRAFT_0749 NitalDRAFT_0793 NitalDRAFT_0878 NitalDRAFT_1726 NitalDRAFT_2650 NitalDRAFT_3269 NitalDRAFT_4318 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | |
Betaine biosynthesis (from choline)(NFUNC_0049) |
必須 | A | BETA (NRULE_0175) | Choline dehydrogenase | NitalDRAFT_0555 |
B | GBSB (NRULE_0176) | Alcohol dehydrogenase | |
BETB (NRULE_0177) | Betaine aldehyde dehydrogenase | NitalDRAFT_0556 |
C | CHOX (NRULE_0178) | Choline oxidase | |
Biotin biosynthesis(NFUNC_0051) |
必須 | A | BIOF (NRULE_0182) | 8-amino-7-oxononanoate synthase | NitalDRAFT_4964 |
BIOA (NRULE_0183) | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | |
BIOD (NRULE_0184) | ATP-dependent dethiobiotin synthetase BioD | NitalDRAFT_4965 |
BIOB (NRULE_0185) | Biotin synthase | NitalDRAFT_4966 |
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013) |
必須 | A | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | NitalDRAFT_4771 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
B | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | NitalDRAFT_4771 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | |
C | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
CATB1 (NRULE_0386) | Muconate cycloisomerase | |
D | CATA (NRULE_0052) | Catechol 1,2-dioxygenase | |
CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
CATC (NRULE_0054) | Muconolactone isomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104) |
必須 | A | PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | NitalDRAFT_1697 NitalDRAFT_4653 NitalDRAFT_4510 NitalDRAFT_3935 NitalDRAFT_3893 NitalDRAFT_3859 NitalDRAFT_2515 |
CLCE (NRULE_0384) | Maleylacetate reductase | |
CLCB (NRULE_0387) | Chloromuconate cycloisomerase | |
B | CATB2 (NRULE_0053) | (Chloro)muconate cycloisomerase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
CLCA (NRULE_0382) | Chlorocatechol 1,2-dioxygenase | |
CLCD (NRULE_0383) | Dienelactone hydrolase | NitalDRAFT_3893 NitalDRAFT_1697 NitalDRAFT_2515 NitalDRAFT_4653 NitalDRAFT_4510 NitalDRAFT_3935 NitalDRAFT_3859 |
CLCE (NRULE_0384) | Maleylacetate reductase | |
任意 | | CLCF (NRULE_0385) | Chloromuconolactone dehalogenase | |
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029) |
必須 | A | DSZA (NRULE_0103) | Dibenzothiophene-5,5-dioxide monooxygenase | |
DSZB (NRULE_0104) | 2'-hydroxybiphenyl-2-sulfinate desulfinase | |
DSZC (NRULE_0105) | Dibenzothiophene monooxygenase | |
任意 | | FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_4677 NitalDRAFT_0616 NitalDRAFT_0146 |
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011) |
必須 | A | EDIO (NRULE_0058) | extradiol dioxygenase | NitalDRAFT_2666 NitalDRAFT_4816 NitalDRAFT_0751 |
METAH (NRULE_0059) | meta-cleavage compound hydrolase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | NitalDRAFT_4813 |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | NitalDRAFT_4812 |
B | EDIO (NRULE_0058) | extradiol dioxygenase | NitalDRAFT_4816 NitalDRAFT_0751 NitalDRAFT_2666 |
2HMSD (NRULE_0060) | 2-hydroxymuconic semialdehyde dehydrogenase | |
4OT (NRULE_0061) | 4-oxalocrotonate tautomerase | |
4OD (NRULE_0062) | 4-oxalocrotonate decarboxylase | |
HPDH (NRULE_0063) | 2-hydroxypent-2,4-dienoate hydratase | |
HOA (NRULE_0064) | 4-hydroxy-2-oxovalerate aldolase | NitalDRAFT_4813 |
ACDH (NRULE_0065) | Acetaldehyde dehydrogenase | NitalDRAFT_4812 |
Ectoine biosynthesis(NFUNC_0056) |
必須 | A | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | NitalDRAFT_4158 |
ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | NitalDRAFT_4157 |
ECTC (NRULE_0188) | L-ectoine synthase | NitalDRAFT_4159 |
Folate biosynthesis(NFUNC_0044) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | NitalDRAFT_0863 |
DHPS (NRULE_0144) | Dihydropteroate synthase | NitalDRAFT_1536 NitalDRAFT_0122 |
FOLM (NRULE_0146) | Dihydrofolate reductase FolM | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | NitalDRAFT_1537 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | NitalDRAFT_1538 |
FOLC (NRULE_0160) | Bifunctional protein FolC | NitalDRAFT_4985 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
B | GLAT (NRULE_0142) | Glutamine amidotransferase | NitalDRAFT_0863 |
DHPS (NRULE_0144) | Dihydropteroate synthase | NitalDRAFT_1536 NitalDRAFT_0122 |
FOLA (NRULE_0147) | Dihydrofolate reductase | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | NitalDRAFT_1537 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | NitalDRAFT_1538 |
FOLC (NRULE_0160) | Bifunctional protein FolC | NitalDRAFT_4985 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
C | GLAT (NRULE_0142) | Glutamine amidotransferase | NitalDRAFT_0863 |
DHPS (NRULE_0144) | Dihydropteroate synthase | NitalDRAFT_0122 NitalDRAFT_1536 |
DFR2 (NRULE_0148) | Dihydrofolate reductase type 2 | |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | NitalDRAFT_1537 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | NitalDRAFT_1538 |
FOLC (NRULE_0160) | Bifunctional protein FolC | NitalDRAFT_4985 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | |
Human milk oligosaccharides metabolism(NFUNC_0083) |
必須 | A | LNBP (NRULE_0112) | 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase | |
任意 | | NAHK (NRULE_0256) | N-acetylhexosamine 1-kinase | |
| GALT (NRULE_0110) | Galactose-1-phosphate uridylyltransferase | NitalDRAFT_1642 |
| GALE (NRULE_0111) | UDP-glucose 4-epimerase | NitalDRAFT_1647 NitalDRAFT_3528 NitalDRAFT_3075 |
Hydroxyectoine biosynthesis(NFUNC_0057) |
必須 | A | ECTD (NRULE_0189) | Ectoine hydroxylase | NitalDRAFT_4160 |
任意 | | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | NitalDRAFT_4158 |
| ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | NitalDRAFT_4157 |
| ECTC (NRULE_0188) | L-ectoine synthase | NitalDRAFT_4159 |
4-hydroxyphenylacetate degradation(NFUNC_0068) |
必須 | A | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
B | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
C | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_4677 NitalDRAFT_0616 NitalDRAFT_0146 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
D | HPAB1 (NRULE_0085) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_0616 NitalDRAFT_0146 NitalDRAFT_4677 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
E | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_0146 NitalDRAFT_0616 NitalDRAFT_4677 |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
F | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_4677 NitalDRAFT_0146 NitalDRAFT_0616 |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
G | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD2 (NRULE_0194) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
H | HPAB2 (NRULE_0086) | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | |
HPAC (NRULE_0102) | 4-hydroxyphenylacetate 3-monooxygenase reductase component | |
HPAD1 (NRULE_0193) | Homoprotocatechuate 2,3-dioxygenase | |
HPAE (NRULE_0195) | 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | |
HPAF (NRULE_0196) | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase | |
HPAG (NRULE_0197) | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase | |
HPAH (NRULE_0198) | 2-oxo-hepta-3-ene-1,7-dioate hydratase | |
HPAI (NRULE_0199) | 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase | |
Macrolide antibiotic resistance(NFUNC_0045) |
必須 | A | ERM (NRULE_0164) | rRNA adenine N-6-methyltransferase | |
B | RLMA (NRULE_0165) | 23S rRNA (guanine-N(1))-methyltransferase | NitalDRAFT_4911 |
C | MACA (NRULE_0166) | Macrolide-specific efflux protein MacA | |
MACB (NRULE_0167) | Macrolide export ATP-binding/permease protein MacB | |
D | ERE (NRULE_0168) | Erythromycin esterase | |
E | MPH (NRULE_0169) | Macrolide 2'-phosphotransferase | |
F | MGT (NRULE_0170) | Macrolide glycosyltransferase | |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | NitalDRAFT_1310 NitalDRAFT_3282 |
B | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | NitalDRAFT_1308 NitalDRAFT_1004 |
D | MNTR (NRULE_0327) | DtxR family transcriptional regulator MntR | |
E | CUER (NRULE_0328) | Copper-responsive transcriptional regulator CueR | |
F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | NitalDRAFT_4852 |
G | ZNTR (NRULE_0330) | Zinc-responsive transcriptional regulator ZntR | |
H | NIKR (NRULE_0331) | Nickel-responsive transcriptional regulator NikR | |
I | ISCR (NRULE_0332) | Rrf2 family transcriptional regulator IscR | |
J | SMTA (NRULE_0009) | Metallothionein | |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | NitalDRAFT_1308 NitalDRAFT_1004 |
任意 | | MODE (NRULE_0323) | Putative molybdate-dependent transcriptional regulator | |
| MODB (NRULE_0325) | Molybdate ABC transporter permease protein | NitalDRAFT_1309 |
| MODC (NRULE_0326) | Molybdate ABC transporter ATP-binding protein | |
Mycosamine biosynthesis(NFUNC_0095) |
必須 | A | AMPHDII (NRULE_0342) | GDP-3-keto-6-deoxy-D-mannose C-3 aminotransferase | |
GMD (NRULE_0343) | GDP-mannose 4,6-dehydratase | NitalDRAFT_3073 |
任意 | | AMPHDI (NRULE_0341) | GDP-mycosamine glycosyltransferase | |
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067) |
必須 | A | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | NitalDRAFT_0749 NitalDRAFT_1726 NitalDRAFT_4752 NitalDRAFT_4814 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | NitalDRAFT_1727 NitalDRAFT_0748 NitalDRAFT_4753 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | NitalDRAFT_0751 NitalDRAFT_4816 NitalDRAFT_2666 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAHG (NRULE_0190) | Salicylate hydroxylase | |
B | RHDA (NRULE_0048) | Ring-hydroxylating dioxygenase alpha subunit | NitalDRAFT_0749 NitalDRAFT_4814 NitalDRAFT_4752 NitalDRAFT_1726 |
RHDB (NRULE_0049) | Ring-hydroxylating dioxygenase beta subunit | NitalDRAFT_1727 NitalDRAFT_0748 NitalDRAFT_4753 |
CDDH (NRULE_0056) | Cis-dihydrodiol dehydrogenase | |
EDIO (NRULE_0058) | extradiol dioxygenase | NitalDRAFT_4816 NitalDRAFT_2666 NitalDRAFT_0751 |
NAHD (NRULE_0171) | 2-hydroxychromene-2-carboxylate isomerase | |
NAHE (NRULE_0172) | Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase | |
NAHF (NRULE_0173) | Salicylaldehyde dehydrogenase | |
NAGG (NRULE_0191) | Salicylate 5-hydroxylase alpha subunit | |
NAGH (NRULE_0192) | Salicylate 5-hydroxylase beta subunit | |
任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_1967 NitalDRAFT_4016 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_1726 NitalDRAFT_0878 NitalDRAFT_3269 NitalDRAFT_0793 NitalDRAFT_0472 NitalDRAFT_4318 NitalDRAFT_4752 NitalDRAFT_4814 NitalDRAFT_0749 NitalDRAFT_2650 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | |
Nitrile hydratase(NFUNC_0002) |
必須 | A | NHAA (NRULE_0001) | Nitrile hydratase subunit alpha | NitalDRAFT_4623 |
NHAB (NRULE_0002) | Nitrile hydratase subunit beta | NitalDRAFT_4622 |
任意 | | P14K (NRULE_0006) | Nitrile hydratase activator P14K | NitalDRAFT_4624 |
| COBW (NRULE_0007) | CobW/P47K family protein | NitalDRAFT_1551 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | NitalDRAFT_1541 |
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | NitalDRAFT_4000 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | |
PANC (NRULE_0118) | Pantothenate synthetase | NitalDRAFT_1540 |
Phenol degradation(NFUNC_0028) |
必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
B | PHEA1 (NRULE_0083) | Aromatic ring hydroxylase | |
C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | |
任意 | | FDR2 (NRULE_0057) | Ferredoxin reductase | |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_4016 NitalDRAFT_1967 |
| MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_4318 NitalDRAFT_4814 NitalDRAFT_4752 NitalDRAFT_0472 NitalDRAFT_0749 NitalDRAFT_0793 NitalDRAFT_0878 NitalDRAFT_1726 NitalDRAFT_2650 NitalDRAFT_3269 |
| FADR1 (NRULE_0101) | NADH-dependent flavin reductase | NitalDRAFT_0616 NitalDRAFT_0146 NitalDRAFT_4677 |
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014) |
必須 | A | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | NitalDRAFT_4767 |
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | NitalDRAFT_4766 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | |
PCAC (NRULE_0069) | 4-carboxymuconolactone decarboxylase | NitalDRAFT_4765 |
PCAD (NRULE_0070) | 3-oxoadipate enol-lactonase | NitalDRAFT_4771 |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
B | PCAG (NRULE_0066) | Protocatechuate 3,4-dioxygenase alpha subunit | NitalDRAFT_4767 |
PCAH (NRULE_0067) | Protocatechuate 3,4-dioxygenase beta subunit | NitalDRAFT_4766 |
PCAB (NRULE_0068) | 3-carboxy-cis,cis-muconate cycloisomerase | |
PCAL (NRULE_0071) | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase | |
PCAI (NRULE_0072) | 3-oxoadipate CoA-transferase subunit A | |
PCAJ (NRULE_0073) | 3-oxoadipate CoA-transferase subunit B | |
PCAF (NRULE_0074) | Beta-ketoadipyl-CoA thiolase | NitalDRAFT_4772 |
Riboflavin biosynthesis(NFUNC_0058) |
必須 | A | RIBB (NRULE_0200) | 3,4-dihydroxy-2-butanone 4-phosphate synthase | NitalDRAFT_2499 NitalDRAFT_3423 |
RIBA (NRULE_0201) | GTP cyclohydrolase-2 | NitalDRAFT_2499 NitalDRAFT_3423 |
RIBD (NRULE_0202) | Riboflavin biosynthesis protein RibD | |
RIBH (NRULE_0203) | 6,7-dimethyl-8-ribityllumazine synthase | NitalDRAFT_3424 |
RIBE (NRULE_0204) | Riboflavin synthase | NitalDRAFT_3422 |
任意 | | RIBF (NRULE_0205) | Riboflavin biosynthesis protein RibF | NitalDRAFT_2485 |
Thiocyanate hydrolase(NFUNC_0003) |
必須 | A | SCNA (NRULE_0003) | Thiocyanate hydrolase subunit alpha | NitalDRAFT_4622 NitalDRAFT_4624 |
SCNB (NRULE_0004) | Thiocyanate hydrolase subunit beta | NitalDRAFT_4624 NitalDRAFT_4622 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
B | SCNA (NRULE_0003) | Thiocyanate hydrolase subunit alpha | NitalDRAFT_4624 NitalDRAFT_4622 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
C | SCNB (NRULE_0004) | Thiocyanate hydrolase subunit beta | NitalDRAFT_4624 NitalDRAFT_4622 |
SCNC (NRULE_0005) | Thiocyanate hydrolase subunit gamma | |
Toluene degradation (conversion into benzoate)(NFUNC_0009) |
必須 | A | XYLA (NRULE_0025) | Xylene monooxygenase electron transfer component | |
XYLM (NRULE_0026) | Xylene monooxygenase | |
BADH (NRULE_0042) | Aryl-alcohol dehydrogenase | NitalDRAFT_4683 |
BZDH1 (NRULE_0043) | Benzaldehyde dehydrogenase | |
B | XYLA (NRULE_0025) | Xylene monooxygenase electron transfer component | |
XYLM (NRULE_0026) | Xylene monooxygenase | |
BADH (NRULE_0042) | Aryl-alcohol dehydrogenase | NitalDRAFT_4683 |
BZDH2 (NRULE_0381) | NAD(P)-dependent benzaldehyde dehydrogenase | |
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007) |
必須 | A | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | NitalDRAFT_1967 NitalDRAFT_4016 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | |
PCHF (NRULE_0035) | 4-cresol dehydrogenase flavoprotein subunit | |
PCHC (NRULE_0036) | 4-cresol dehydrogenase cytochrome c subunit | |
PCHA (NRULE_0037) | p-hydroxybenzaldehyde dehydrogenase | |
POBA (NRULE_0038) | p-hydroxybenzoate hydroxylase | NitalDRAFT_4763 |
任意 | | MMG1 (NRULE_0029) | Multicomponent monooxygenase gamma subunit | |
| MMG2 (NRULE_0030) | Multicomponent monooxygenase gamma subunit | |
| MMG3 (NRULE_0031) | Multicomponent monooxygenase gamma subunit | |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | NitalDRAFT_4814 NitalDRAFT_3269 NitalDRAFT_2650 NitalDRAFT_1726 NitalDRAFT_0472 NitalDRAFT_0793 NitalDRAFT_0749 NitalDRAFT_4752 NitalDRAFT_4318 NitalDRAFT_0878 |
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037) |
必須 | A | TREY (NRULE_0140) | Maltooligosyl trehalose synthase | NitalDRAFT_3914 |
TREZ (NRULE_0141) | Malto-oligosyltrehalose trehalohydrolase | NitalDRAFT_3916 |
任意 | | GLGX (NRULE_0139) | Glycogen debranching enzyme | NitalDRAFT_3915 |
Trehalose biosynthesis (from maltose)(NFUNC_0034) |
必須 | A | MAPA (NRULE_0126) | Maltose phosphorylase | |
TREP (NRULE_0127) | Alpha,alpha-trehalose phosphorylase | NitalDRAFT_3630 |
B | TRES (NRULE_0128) | Trehalose synthase | NitalDRAFT_3919 |
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031) |
必須 | A | TPS (NRULE_0119) | Trehalose-phosphate synthase | |
TPP (NRULE_0120) | Trehalose-6-phosphate phosphatase | NitalDRAFT_4201 |
Uptake of osmoprotectant(NFUNC_0061) |
必須 | A | OPUAC (NRULE_0213) | Osmoprotectant ABC transporter substrate-binding protein | |
OPUAB (NRULE_0214) | Osmoprotectant ABC transporter permease protein | |
OPUAA (NRULE_0215) | Osmoprotectant ABC transporter ATP-binding protein | NitalDRAFT_0552 |
B | EHUB (NRULE_0216) | Ectoine ABC transporter substrate-binding protein | NitalDRAFT_1672 |
EHUC (NRULE_0217) | Ectoine ABC transporter permease protein | |
EHUD (NRULE_0218) | Ectoine ABC transporter permease protein | NitalDRAFT_1674 |
EHUA (NRULE_0219) | Ectoine ABC transporter ATP-binding protein | NitalDRAFT_1675 |
C | BCCT (NRULE_0220) | BCCT family transporter | NitalDRAFT_0706 NitalDRAFT_1845 |
D | PROP (NRULE_0221) | Osmoprotectant transporter | |
E | OPUE (NRULE_0222) | Sodium/proline symporter | NitalDRAFT_0503 |
F | TEAA (NRULE_0223) | TRAP transporter substrate-binding protein TeaA | |
TEAB (NRULE_0224) | TRAP transporter small transmembrane protein TeaB | |
TEAC (NRULE_0225) | TRAP transporter large transmembrane protein TeaC | |
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059) |
必須 | A | PDXS (NRULE_0206) | Pyridoxal biosynthesis lyase PdxS | NitalDRAFT_3333 |
PDXT (NRULE_0207) | Glutamine amidotransferase subunit PdxT | NitalDRAFT_3334 |