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推定保有機能 : Gordonia alkanivorans

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タイプパターン 構成遺伝子 該当CDS
Acid resistance (by GABA antiporter)(NFUNC_0071)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGOALK_060_00450
GADC
(NRULE_0234)
Glutamate/gamma-aminobutyrate antiporter
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseGOALK_112_00030
n-alkane hydroxylation(NFUNC_0008)
必須A
CYP153
(NRULE_0041)
Cytochrome P450 CYP153GOALK_030_00300
B
ALKB
(NRULE_0024)
Alkane 1-monooxygenase
C
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGOALK_097_00590 GOALK_097_00610
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGOALK_097_00610 GOALK_097_00590
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_046_00030 GOALK_026_00820 GOALK_047_00140 GOALK_050_02720 GOALK_056_01700 GOALK_092_00710 GOALK_097_02350 GOALK_097_00600 GOALK_097_00840 GOALK_118_00150 GOALK_118_00240 GOALK_120_01060 GOALK_122_00020
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGOALK_097_00620
任意 
RUBA
(NRULE_0039)
Rubredoxin
 
RUBB
(NRULE_0040)
Rubredoxin reductase
 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_026_00690 GOALK_050_01650 GOALK_056_01250 GOALK_086_00020 GOALK_092_00560 GOALK_047_00120 GOALK_045_00600 GOALK_035_00050 GOALK_002_01210
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseGOALK_089_00400
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinase
D
HPH
(NRULE_0174)
Hygromycin-B 4-O-kinase
Aniline degradation (conversion into catechol)(NFUNC_0075)
必須A
ATDA1
(NRULE_0240)
Gamma-glutamylanilide synthetaseGOALK_035_00090
ATDA3
(NRULE_0357)
Aniline dioxygenase large subunitGOALK_035_00050
ATDA4
(NRULE_0358)
Aniline dioxygenase small subunitGOALK_035_00060
任意 
ATDA2
(NRULE_0241)
Putative gamma-glutamylanilide hydrolase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_050_02720 GOALK_122_00020 GOALK_120_01060 GOALK_118_00240 GOALK_118_00150 GOALK_097_00840 GOALK_097_00600 GOALK_097_02350 GOALK_092_00710 GOALK_056_01700 GOALK_047_00140 GOALK_046_00030 GOALK_026_00820
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_002_01210 GOALK_035_00050 GOALK_026_00690 GOALK_092_00560 GOALK_086_00020 GOALK_056_01250 GOALK_050_01650 GOALK_047_00120 GOALK_045_00600
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_035_00110 GOALK_065_00110
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGOALK_120_01870 GOALK_117_00210
TRPE
(NRULE_0143)
Anthranilate synthase component IGOALK_066_00120
Anthranilate degradation (via hydroxylation)(NFUNC_0018)
必須A
ANTA
(NRULE_0044)
Anthranilate 1,2-dioxygenase large subunit
ANTB
(NRULE_0045)
Anthranilate 1,2-dioxygenase small subunit
任意 
ANTC
(NRULE_0081)
Anthranilate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_122_00020 GOALK_097_00600 GOALK_097_00840 GOALK_118_00150 GOALK_097_02350 GOALK_092_00710 GOALK_056_01700 GOALK_050_02720 GOALK_047_00140 GOALK_046_00030 GOALK_026_00820 GOALK_118_00240 GOALK_120_01060
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_002_01210 GOALK_026_00690 GOALK_035_00050 GOALK_092_00560 GOALK_086_00020 GOALK_056_01250 GOALK_050_01650 GOALK_047_00120 GOALK_045_00600
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_035_00110 GOALK_065_00110
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGOALK_035_00050 GOALK_047_00120
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGOALK_047_00130 GOALK_035_00060
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_097_00600 GOALK_118_00150 GOALK_097_00840 GOALK_047_00140 GOALK_046_00030 GOALK_122_00020 GOALK_120_01060 GOALK_118_00240 GOALK_026_00820 GOALK_050_02720 GOALK_056_01700 GOALK_092_00710 GOALK_097_02350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_035_00050 GOALK_045_00600 GOALK_047_00120 GOALK_050_01650 GOALK_056_01250 GOALK_086_00020 GOALK_092_00560 GOALK_026_00690 GOALK_002_01210
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_065_00110 GOALK_035_00110
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC1
(NRULE_0017)
Arsenate reductaseGOALK_038_00940
B
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC2
(NRULE_0018)
Arsenate reductase
C
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC3
(NRULE_0019)
Arsenate reductase
D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGOALK_105_00020 GOALK_114_00300
ARSC1
(NRULE_0017)
Arsenate reductaseGOALK_038_00940
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGOALK_114_00300 GOALK_105_00020
ARSC2
(NRULE_0018)
Arsenate reductase
F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBGOALK_105_00020 GOALK_114_00300
ARSC3
(NRULE_0019)
Arsenate reductase
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPase
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsD
 
ARSH
(NRULE_0021)
ArsH protein
Artificial lacto-N-biose biosynthesis(NFUNC_0026)
必須A
SP
(NRULE_0109)
Sucrose phosphorylase
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGOALK_005_00100
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseGOALK_099_00970
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunitGOALK_047_00120
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunitGOALK_047_00130
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseGOALK_047_00140
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer componentGOALK_047_00140
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_050_02720 GOALK_056_01700 GOALK_046_00030 GOALK_026_00820 GOALK_092_00710 GOALK_097_02350 GOALK_047_00140 GOALK_097_00840 GOALK_118_00150 GOALK_118_00240 GOALK_120_01060 GOALK_122_00020 GOALK_097_00600
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_002_01210 GOALK_026_00690 GOALK_035_00050 GOALK_045_00600 GOALK_047_00120 GOALK_050_01650 GOALK_056_01250 GOALK_086_00020 GOALK_092_00560
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_065_00110 GOALK_035_00110
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenase
B
GBSB
(NRULE_0176)
Alcohol dehydrogenase
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseGOALK_050_01170
C
CHOX
(NRULE_0178)
Choline oxidaseGOALK_050_01160
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthase
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseGOALK_084_00140
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDGOALK_084_00120
BIOB
(NRULE_0185)
Biotin synthaseGOALK_084_00110
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGOALK_038_00950 GOALK_047_00090
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGOALK_047_00080
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGOALK_047_00180
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_038_00790 GOALK_047_00190 GOALK_092_00090
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGOALK_038_00950 GOALK_047_00090
CATC
(NRULE_0054)
Muconolactone isomeraseGOALK_047_00080
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGOALK_047_00180
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_038_00790 GOALK_092_00090 GOALK_047_00190
CATB1
(NRULE_0386)
Muconate cycloisomerase
C
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGOALK_047_00090 GOALK_038_00950
CATC
(NRULE_0054)
Muconolactone isomeraseGOALK_047_00080
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_047_00190 GOALK_038_00790 GOALK_092_00090
CATB1
(NRULE_0386)
Muconate cycloisomerase
D
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseGOALK_038_00950 GOALK_047_00090
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomeraseGOALK_047_00080
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_038_00790 GOALK_047_00190 GOALK_092_00090
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104)
必須A
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_092_00090 GOALK_047_00190 GOALK_038_00790
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGOALK_045_00410 GOALK_050_00510 GOALK_053_00060 GOALK_100_00050 GOALK_100_00350 GOALK_116_00130
CLCE
(NRULE_0384)
Maleylacetate reductase
CLCB
(NRULE_0387)
Chloromuconate cycloisomerase
B
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_092_00090 GOALK_047_00190 GOALK_038_00790
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseGOALK_045_00410 GOALK_116_00130 GOALK_100_00350 GOALK_100_00050 GOALK_053_00060 GOALK_050_00510
CLCE
(NRULE_0384)
Maleylacetate reductase
任意 
CLCF
(NRULE_0385)
Chloromuconolactone dehalogenase
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029)
必須A
DSZA
(NRULE_0103)
Dibenzothiophene-5,5-dioxide monooxygenase
DSZB
(NRULE_0104)
2'-hydroxybiphenyl-2-sulfinate desulfinase
DSZC
(NRULE_0105)
Dibenzothiophene monooxygenase
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_050_01680 GOALK_065_00050 GOALK_067_00250 GOALK_110_00430 GOALK_092_00120 GOALK_079_00080 GOALK_033_01250 GOALK_038_00980 GOALK_026_00060 GOALK_026_00790
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011)
必須A
EDIO
(NRULE_0058)
extradiol dioxygenaseGOALK_026_00130 GOALK_075_00190 GOALK_075_00180 GOALK_050_01670 GOALK_026_00740
METAH
(NRULE_0059)
meta-cleavage compound hydrolase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGOALK_050_01560 GOALK_026_00900
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGOALK_026_00890 GOALK_050_01550
B
EDIO
(NRULE_0058)
extradiol dioxygenaseGOALK_050_01670 GOALK_075_00180 GOALK_075_00190 GOALK_026_00740 GOALK_026_00130
2HMSD
(NRULE_0060)
2-hydroxymuconic semialdehyde dehydrogenase
4OT
(NRULE_0061)
4-oxalocrotonate tautomerase
4OD
(NRULE_0062)
4-oxalocrotonate decarboxylase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolaseGOALK_050_01560 GOALK_026_00900
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenaseGOALK_050_01550 GOALK_026_00890
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGOALK_040_00390
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGOALK_040_00380
ECTC
(NRULE_0188)
L-ectoine synthaseGOALK_040_00400
Folate biosynthesis(NFUNC_0044)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseGOALK_120_01870 GOALK_117_00210
DHPS
(NRULE_0144)
Dihydropteroate synthaseGOALK_072_01490 GOALK_015_00220
FOLM
(NRULE_0146)
Dihydrofolate reductase FolM
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGOALK_015_00210
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGOALK_015_00200
FOLC
(NRULE_0160)
Bifunctional protein FolCGOALK_040_00520
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGOALK_117_00210
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
B
GLAT
(NRULE_0142)
Glutamine amidotransferaseGOALK_117_00210 GOALK_120_01870
DHPS
(NRULE_0144)
Dihydropteroate synthaseGOALK_015_00220 GOALK_072_01490
FOLA
(NRULE_0147)
Dihydrofolate reductaseGOALK_077_00510
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGOALK_015_00210
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGOALK_015_00200
FOLC
(NRULE_0160)
Bifunctional protein FolCGOALK_040_00520
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGOALK_117_00210
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
C
GLAT
(NRULE_0142)
Glutamine amidotransferaseGOALK_117_00210 GOALK_120_01870
DHPS
(NRULE_0144)
Dihydropteroate synthaseGOALK_015_00220 GOALK_072_01490
DFR2
(NRULE_0148)
Dihydrofolate reductase type 2
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseGOALK_015_00210
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseGOALK_015_00200
FOLC
(NRULE_0160)
Bifunctional protein FolCGOALK_040_00520
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IGOALK_117_00210
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseGOALK_060_00450
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010)
必須A
DHAA
(NRULE_0050)
Haloalkane dehalogenase
HAD
(NRULE_0051)
(S)-2-haloacid dehalogenaseGOALK_060_01230
B
DHAA
(NRULE_0050)
Haloalkane dehalogenase
DEH
(NRULE_0075)
Haloacetate dehalogenase
Human milk oligosaccharides metabolism(NFUNC_0083)
必須A
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
任意 
NAHK
(NRULE_0256)
N-acetylhexosamine 1-kinase
 
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
 
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseGOALK_005_00100
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylase
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseGOALK_040_00390
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseGOALK_040_00380
 
ECTC
(NRULE_0188)
L-ectoine synthaseGOALK_040_00400
4-hydroxyphenylacetate degradation(NFUNC_0068)
必須A
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
B
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
C
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_050_01680 GOALK_038_00980 GOALK_033_01250 GOALK_026_00790 GOALK_065_00050 GOALK_110_00430 GOALK_092_00120 GOALK_026_00060 GOALK_079_00080 GOALK_067_00250
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
D
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_038_00980 GOALK_067_00250 GOALK_065_00050 GOALK_050_01680 GOALK_026_00060 GOALK_026_00790 GOALK_033_01250 GOALK_110_00430 GOALK_092_00120 GOALK_079_00080
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
E
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_038_00980 GOALK_050_01680 GOALK_065_00050 GOALK_026_00790 GOALK_026_00060 GOALK_033_01250 GOALK_067_00250 GOALK_079_00080 GOALK_092_00120 GOALK_110_00430
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
F
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_079_00080 GOALK_065_00050 GOALK_050_01680 GOALK_038_00980 GOALK_033_01250 GOALK_026_00790 GOALK_026_00060 GOALK_110_00430 GOALK_092_00120 GOALK_067_00250
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
G
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
H
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseGOALK_060_00910
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinGOALK_045_00080 GOALK_045_00050 GOALK_045_00010 GOALK_072_00080
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGOALK_072_00110 GOALK_045_00070
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntR
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueR
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRGOALK_038_00430
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntR
H
NIKR
(NRULE_0331)
Nickel-responsive transcriptional regulator NikR
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscR
J
SMTA
(NRULE_0009)
Metallothionein
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinGOALK_072_00110 GOALK_045_00070
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinGOALK_045_00060
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding protein
Mycosamine biosynthesis(NFUNC_0095)
必須A
AMPHDII
(NRULE_0342)
GDP-3-keto-6-deoxy-D-mannose C-3 aminotransferase
GMD
(NRULE_0343)
GDP-mannose 4,6-dehydrataseGOALK_050_03210
任意 
AMPHDI
(NRULE_0341)
GDP-mycosamine glycosyltransferase
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGOALK_035_00050 GOALK_047_00120
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGOALK_035_00060 GOALK_047_00130
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGOALK_026_00740 GOALK_026_00130 GOALK_075_00180 GOALK_075_00190 GOALK_050_01670
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAHG
(NRULE_0190)
Salicylate hydroxylase
B
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitGOALK_035_00050 GOALK_047_00120
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunitGOALK_047_00130 GOALK_035_00060
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseGOALK_026_00740 GOALK_050_01670 GOALK_026_00130 GOALK_075_00190 GOALK_075_00180
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAGG
(NRULE_0191)
Salicylate 5-hydroxylase alpha subunit
NAGH
(NRULE_0192)
Salicylate 5-hydroxylase beta subunit
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_097_00600 GOALK_097_02350 GOALK_092_00710 GOALK_056_01700 GOALK_050_02720 GOALK_047_00140 GOALK_046_00030 GOALK_026_00820 GOALK_118_00240 GOALK_120_01060 GOALK_118_00150 GOALK_122_00020 GOALK_097_00840
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_047_00120 GOALK_002_01210 GOALK_026_00690 GOALK_035_00050 GOALK_045_00600 GOALK_050_01650 GOALK_056_01250 GOALK_086_00020 GOALK_092_00560
 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_035_00110 GOALK_065_00110
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alpha
NHAB
(NRULE_0002)
Nitrile hydratase subunit beta
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14K
 
COBW
(NRULE_0007)
CobW/P47K family proteinGOALK_026_00230 GOALK_120_01740
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseGOALK_015_00130
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseGOALK_002_00920
PANE
(NRULE_0117)
2-dehydropantoate 2-reductase
PANC
(NRULE_0118)
Pantothenate synthetaseGOALK_015_00140
Phenol degradation(NFUNC_0028)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGOALK_097_00610 GOALK_097_00590
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGOALK_097_00590 GOALK_097_00610
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseGOALK_038_00960 GOALK_065_00040
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylase
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseGOALK_065_00110 GOALK_035_00110
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_050_02720 GOALK_046_00030 GOALK_026_00820 GOALK_120_01060 GOALK_122_00020 GOALK_118_00240 GOALK_118_00150 GOALK_097_00840 GOALK_097_00600 GOALK_097_02350 GOALK_092_00710 GOALK_056_01700 GOALK_047_00140
 
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGOALK_097_00620
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_045_00600 GOALK_047_00120 GOALK_092_00560 GOALK_086_00020 GOALK_056_01250 GOALK_050_01650 GOALK_002_01210 GOALK_035_00050 GOALK_026_00690
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseGOALK_038_00980 GOALK_026_00790 GOALK_026_00060 GOALK_110_00430 GOALK_092_00120 GOALK_079_00080 GOALK_067_00250 GOALK_065_00050 GOALK_050_01680 GOALK_033_01250
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunit
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunit
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylase
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseGOALK_047_00180
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_038_00790 GOALK_092_00090 GOALK_047_00190
B
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunit
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunit
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AGOALK_047_00170
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseGOALK_047_00190 GOALK_038_00790 GOALK_092_00090
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseGOALK_079_00020 GOALK_017_00310 GOALK_033_01240
RIBA
(NRULE_0201)
GTP cyclohydrolase-2GOALK_033_01240 GOALK_029_00020 GOALK_017_00310 GOALK_079_00020
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibD
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseGOALK_017_00320
RIBE
(NRULE_0204)
Riboflavin synthaseGOALK_017_00300
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFGOALK_077_00680
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferase
B
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferase
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseGOALK_089_00400
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
Thiocyanate hydrolase(NFUNC_0003)
必須A
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaGOALK_120_01460
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaGOALK_120_01460
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGOALK_120_01470
B
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaGOALK_120_01460
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGOALK_120_01470
C
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaGOALK_120_01460
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gammaGOALK_120_01470
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunitGOALK_097_00610 GOALK_097_00590
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunitGOALK_097_00590 GOALK_097_00610
FDR1
(NRULE_0032)
Oxygenase electron transfer componentGOALK_120_01060 GOALK_122_00020 GOALK_118_00150 GOALK_118_00240 GOALK_026_00820 GOALK_046_00030 GOALK_047_00140 GOALK_050_02720 GOALK_056_01700 GOALK_092_00710 GOALK_097_02350 GOALK_097_00600 GOALK_097_00840
MME
(NRULE_0033)
Multicomponent monooxygenase effector proteinGOALK_097_00620
PCHF
(NRULE_0035)
4-cresol dehydrogenase flavoprotein subunit
PCHC
(NRULE_0036)
4-cresol dehydrogenase cytochrome c subunit
PCHA
(NRULE_0037)
p-hydroxybenzaldehyde dehydrogenase
POBA
(NRULE_0038)
p-hydroxybenzoate hydroxylase
任意 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinGOALK_026_00690 GOALK_002_01210 GOALK_050_01650 GOALK_047_00120 GOALK_045_00600 GOALK_035_00050 GOALK_056_01250 GOALK_086_00020 GOALK_092_00560
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseGOALK_084_00180
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseGOALK_002_01900
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeGOALK_084_00170
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseGOALK_050_00720
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseGOALK_014_00440 GOALK_050_00710
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding protein
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease protein
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding protein
B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding protein
EHUC
(NRULE_0217)
Ectoine ABC transporter permease protein
EHUD
(NRULE_0218)
Ectoine ABC transporter permease protein
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding protein
C
BCCT
(NRULE_0220)
BCCT family transporterGOALK_038_00480 GOALK_050_01180
D
PROP
(NRULE_0221)
Osmoprotectant transporter
E
OPUE
(NRULE_0222)
Sodium/proline symporter
F
TEAA
(NRULE_0223)
TRAP transporter substrate-binding protein TeaA
TEAB
(NRULE_0224)
TRAP transporter small transmembrane protein TeaB
TEAC
(NRULE_0225)
TRAP transporter large transmembrane protein TeaC
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenase
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenase
SERC
(NRULE_0210)
Phosphoserine aminotransferaseGOALK_131_00210
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenase
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthase
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSGOALK_014_00360
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTGOALK_014_00300